RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 D2HGDHQ8N465 521 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 BEND7Q8N7W2 519 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 GDAP1Q8TB36 358 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 IQCDQ96DY2 449 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 RNF31Q96EP0 1072 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF514Q96K75 400 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TUBB2BQ9BVA1 445 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 MAK16Q9BXY0 300 aaKnown RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZCCHC2Q9C0B9 1178 aaKnown RBP8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ING2Q9H160 280 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TRABDQ9H4I3 376 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 CBX8Q9HC52 389 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 IL26Q9NPH9 171 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ACSS2Q9NR19 701 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF358Q9NW07 568 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 CTTNBP2NLQ9P2B4 639 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 UVRAGQ9P2Y5 699 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 TRIM10Q9UDY6 481 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 CAPN11Q9UMQ6 739 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 WDR37Q9Y2I8 494 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 ZNF451Q9Y4E5 1061 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 HEY1Q9Y5J3 304 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 HIVEP3Q5T1R4 2406 aa8.56□□□□□ -1.04
CAPN3-208ENST00000397204 KLHL33A6NCF5 533 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 TLCD2A6NGC4 264 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 AURKAO14965 403 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 CPNE3O75131 537 aaKnown RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 MTX2O75431 263 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 CEACAM4O75871 244 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 SORBS2O94875 1100 aaKnown RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 ZBTB11O95625 1053 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 MBD3O95983 291 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 EPOP01588 193 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 KLK3P07288 261 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 THBS1P07996 1170 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 RAB40ALP0C0E4 278 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 MSX1P28360 303 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 GJC1P36383 396 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 UQCRFS1P47985 274 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 GSDMDP57764 484 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 LAMB3Q13751 1172 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 KCNAB1Q14722 419 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 INPP5JQ15735 1006 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 CHRNA6Q15825 494 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 NADK2Q4G0N4 442 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 TEX44Q53QW1 395 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 LDLRAP1Q5SW96 308 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 TMTC4Q5T4D3 741 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 IZUMO3Q5VZ72 239 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 METRNLQ641Q3 311 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 SLC9A4Q6AI14 798 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 TMEM220Q6QAJ8 160 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 BZW1Q7L1Q6 419 aaKnown RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 PLD5Q8N7P1 536 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 RAPGEF5Q92565 580 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 MR1Q95460 341 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 TEKT5Q96M29 485 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 LRFN5Q96NI6 719 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 AGAP3Q96P47 875 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 MAP3K3Q99759 626 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 RUBCNLQ9H714 662 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 GLOD4Q9HC38 313 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 SYTL2Q9HCH5 934 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 BPIFA1Q9NP55 256 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 LATS2Q9NRM7 1088 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 HRASLS2Q9NWW9 162 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 ACSL5Q9ULC5 683 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 G3BP2Q9UN86 482 aaKnown RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 LUC7L2Q9Y383 392 aaKnown RBP8.55□□□□□ -1.04
CAPN3-208ENST00000397204 ABCA12Q86UK0 2595 aa8.55□□□□□ -1.04
CAPN3-208ENST00000397204 POLEQ07864 2286 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 CACNA1DQ01668 2161 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 MED13Q9UHV7 2174 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 LOC285095A0A1B0GVY8 99 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 OR5K3A6NET4 321 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 ARGFXA6NJG6 315 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 CDK2AP1O14519 115 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 PPP1R12AO14974 1030 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-208ENST00000397204 UGT1A9O60656 530 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 DPM1O60762 260 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 SCRG1O75711 98 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 EBLN1P0CF75 366 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 UGT1A6P19224 532 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 UGT1A1P22309 533 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 UGT1A4P22310 534 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 PBX1P40424 430 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 PPP1CAP62136 330 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 PLCL1Q15111 1095 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 PCSK7Q16549 785 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 DNTTIP2Q5QJE6 756 aaKnown RBP8.54□□□□□ -1.04
CAPN3-208ENST00000397204 ARMC6Q6NXE6 501 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 JMJD6Q6NYC1 403 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-208ENST00000397204 MED25Q71SY5 747 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 CPNE8Q86YQ8 564 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 TMEM126BQ8IUX1 230 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 RHOT1Q8IXI2 618 aa8.54□□□□□ -1.04
CAPN3-208ENST00000397204 RASGEF1AQ8N9B8 481 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms