RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 E5RI56 91 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 RNGTTO60942 597 aaKnown RBP13.05□□□□□ -0.32
SEC13-209ENST00000397117 PYGLP06737 847 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 RALBP11234 206 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 PKMP14618 531 aaKnown RBP13.05□□□□□ -0.32
SEC13-209ENST00000397117 AKT1P31749 480 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 CCNFP41002 786 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 NSG1P42857 185 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 MAGEA12P43365 314 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 GPR1P46091 355 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 CCR5P51681 352 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 PPARDQ03181 441 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 DPTQ07507 201 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 DMTNQ08495 405 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 TARDBPQ13148 414 aaKnown RBP eCLIP13.05□□□□□ -0.321e-7■■□□□ 14.1
SEC13-209ENST00000397117 PDE1CQ14123 709 aaPredicted RBP13.05□□□□□ -0.32
SEC13-209ENST00000397117 GPRC6AQ5T6X5 926 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 PTRHD1Q6GMV3 140 aaKnown RBP13.05□□□□□ -0.32
SEC13-209ENST00000397117 NEK5Q6P3R8 708 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 SH2D5Q6ZV89 423 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 NLRP8Q86W28 1048 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 ANKRD42Q8N9B4 389 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 HEXDCQ8WVB3 486 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 BTN2A2Q8WVV5 523 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 GLYATL1Q969I3 302 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 SKA1Q96BD8 255 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 VPS35Q96QK1 796 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 C1QTNF7Q9BXJ2 289 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 TAS2R13Q9NYV9 303 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 ZNF462Q96JM2 2506 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 A0A087X1B8 175 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 FADS2P1A8MWK0 482 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 H3BMM5 538 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 PHGDHO43175 533 aaKnown RBP13.04□□□□□ -0.32
SEC13-209ENST00000397117 VPS26AO75436 327 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 SLC25A14O95258 325 aaPredicted RBP13.04□□□□□ -0.32
SEC13-209ENST00000397117 C2P06681 752 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 MSH3P20585 1137 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 RPS3P23396 243 aaKnown RBP eCLIP13.04□□□□□ -0.323e-8■■■□□ 19.1
SEC13-209ENST00000397117 CD38P28907 300 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 CRHR1P34998 444 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 CA5AP35218 305 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 RPA3P35244 121 aaPredicted RBP13.04□□□□□ -0.32
SEC13-209ENST00000397117 GYS2P54840 703 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 CDKN2DP55273 166 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
SEC13-209ENST00000397117 LRRC14Q15048 493 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
SEC13-209ENST00000397117 LDLRAP1Q5SW96 308 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 ZNF549Q6P9A3 640 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 LRRC69Q6ZNQ3 347 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 CCDC91Q7Z6B0 441 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 HORMAD1Q86X24 394 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 PHYKPLQ8IUZ5 450 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 CEP97Q8IW35 865 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 EID2Q8N6I1 236 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 OR2T34Q8NGX1 318 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 BIRC8Q96P09 236 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 OLFM1Q99784 485 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 BOCQ9BWV1 1114 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 P2RY12Q9H244 342 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 MKS1Q9NXB0 559 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 DCDC2Q9UHG0 476 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 ZFR2Q9UPR6 939 aaKnown RBP13.04□□□□□ -0.32
SEC13-209ENST00000397117 ACOT9Q9Y305 439 aa13.04□□□□□ -0.32
SEC13-209ENST00000397117 ZNF106Q9H2Y7 1883 aaKnown RBP13.04□□□□□ -0.32
SEC13-209ENST00000397117 F8W8V4 182 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 TM9SF1O15321 606 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 INPP4BO15327 924 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 YKT6O15498 198 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 TYROBPO43914 113 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 ZWINTO95229 277 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 PCCBP05166 539 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 CHRM3P20309 590 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 FDXRP22570 491 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 SLC18A1P54219 525 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 BNIP3Q12983 259 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 ZNF460Q14592 562 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 AGERQ15109 404 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 HES3Q5TGS1 186 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 UGT3A1Q6NUS8 523 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D1Q86TI0 1168 aaPredicted RBP13.03□□□□□ -0.32
SEC13-209ENST00000397117 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 DDHD1Q8NEL9 900 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 SNIP1Q8TAD8 396 aaKnown RBP13.03□□□□□ -0.32
SEC13-209ENST00000397117 MGARPQ8TDB4 240 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 C1QTNF2Q9BXJ5 285 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 SLC17A9Q9BYT1 436 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 ADAM21Q9UKJ8 722 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 TMPRSS11EQ9UL52 423 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 AK5Q9Y6K8 562 aa13.03□□□□□ -0.32
SEC13-209ENST00000397117 IGLV3-16A0A075B6K0 115 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 K7ESM1 405 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 GLRA3O75311 464 aa13.02□□□□□ -0.32
SEC13-209ENST00000397117 PAK4O96013 591 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms