RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 LEPRP48357 1165 aaKnown RBP18.81■□□□□ 0.6
HOXA9-202ENST00000396345 CLCA4Q14CN2 919 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 PERM1Q5SV97 790 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 KIAA0408Q6ZU52 694 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 C3orf62Q6ZUJ4 267 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 LKAAEAR1Q8TD35 194 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 CCDC74AQ96AQ1 378 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 WWP1Q9H0M0 922 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 ZFATQ9P243 1243 aa18.81■□□□□ 0.6
HOXA9-202ENST00000396345 ASXL3Q9C0F0 2248 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 DKK1O94907 266 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 SLC35G4P0C7Q5 338 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 XRCC1P18887 633 aaPredicted RBP18.8■□□□□ 0.6
HOXA9-202ENST00000396345 CCR7P32248 378 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 FASLGP48023 281 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 PREPP48147 710 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 GPX6P59796 221 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 TUBB4BP68371 445 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 PLOD1Q02809 727 aaPredicted RBP18.8■□□□□ 0.6
HOXA9-202ENST00000396345 RPA4Q13156 261 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 BOP1Q14137 746 aaKnown RBP18.8■□□□□ 0.6
HOXA9-202ENST00000396345 BRD3Q15059 726 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 SYTL3Q4VX76 610 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 CNSTQ6PJW8 725 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 NAPRTQ6XQN6 538 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 TRIM48Q8IWZ4 208 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 AVL9Q8NBF6 648 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 CCDC3Q9BQI4 270 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 CCDC68Q9H2F9 335 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 STN1Q9H668 368 aaKnown RBP18.8■□□□□ 0.6
HOXA9-202ENST00000396345 LRRC4CQ9HCJ2 640 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 SARS2Q9NP81 518 aaKnown RBP18.8■□□□□ 0.6
HOXA9-202ENST00000396345 ZNF624Q9P2J8 865 aaPredicted RBP18.8■□□□□ 0.6
HOXA9-202ENST00000396345 SLC17A6Q9P2U8 582 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 CPNE7Q9UBL6 633 aa18.8■□□□□ 0.6
HOXA9-202ENST00000396345 SLC5A10A0PJK1 596 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 OR52A4PA6NMU1 304 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 PPM1DO15297 605 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 NIPSNAP2O75323 286 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 AHSGP02765 367 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 CDK4P11802 303 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 PNLIPP16233 465 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 AOAHP28039 575 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 PDHA2P29803 388 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 SLC19A1P41440 591 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 CSE1LP55060 971 aaKnown RBP18.79■□□□□ 0.6
HOXA9-202ENST00000396345 UBE2IP63279 158 aaKnown RBP18.79■□□□□ 0.6
HOXA9-202ENST00000396345 E2F1Q01094 437 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 HHEXQ03014 270 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 RPE65Q16518 533 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.79■□□□□ 0.6
HOXA9-202ENST00000396345 CYS1Q717R9 158 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 GALNT7Q86SF2 657 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 RELL1Q8IUW5 271 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 TMEM159Q96B96 161 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 CXorf40BQ96DE9 158 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 RMDN2Q96LZ7 410 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 INSM2Q96T92 566 aaPredicted RBP18.79■□□□□ 0.6
HOXA9-202ENST00000396345 OR52A5Q9H2C5 316 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 RABGEF1Q9UJ41 708 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 COMMD10Q9Y6G5 202 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 RP1P56715 2156 aa18.79■□□□□ 0.6
HOXA9-202ENST00000396345 SPTBN2O15020 2390 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 TCRBV9S1A1TA0A576 114 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 E5RI56 91 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 KPNA5O15131 536 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 SPAG6O75602 509 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 VIPP01282 170 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 APOA4P06727 396 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 CHRM3P20309 590 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 GABRB3P28472 473 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 HSPA14Q0VDF9 509 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 TMED2Q15363 201 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 KYNUQ16719 465 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 N4BP2L1Q5TBK1 243 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-202ENST00000396345 CAPRIN2Q6IMN6 1127 aaKnown RBP18.78■□□□□ 0.6
HOXA9-202ENST00000396345 ZNF549Q6P9A3 640 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 OTOAQ7RTW8 1153 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 ZNF438Q7Z4V0 828 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 SLC26A11Q86WA9 606 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 Q8N9G6 341 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-202ENST00000396345 SPDYE1Q8NFV5 336 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-202ENST00000396345 ASZ1Q8WWH4 475 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 CDKL2Q92772 493 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 SH3KBP1Q96B97 665 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 C12orf66Q96MD2 445 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 ABCG4Q9H172 646 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 NSMCE4AQ9NXX6 385 aa18.78■□□□□ 0.6
HOXA9-202ENST00000396345 CFAP20Q9Y6A4 193 aaKnown RBP18.78■□□□□ 0.6
HOXA9-202ENST00000396345 IFRD1O00458 451 aaPredicted RBP18.77■□□□□ 0.6
HOXA9-202ENST00000396345 OPA1O60313 960 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 MTHFD1P11586 935 aaKnown RBP18.77■□□□□ 0.6
HOXA9-202ENST00000396345 STX2P32856 288 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 GPR3P46089 330 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 CD151P48509 253 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 DHRS13Q6UX07 377 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 STRA8Q7Z7C7 330 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 FAM136AQ96C01 138 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 SLC38A3Q99624 504 aa18.77■□□□□ 0.6
HOXA9-202ENST00000396345 AARSD1Q9BTE6 412 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms