RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TRIM74Q86UV6 250 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 TRIM73Q86UV7 250 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 ZBTB46Q86UZ6 589 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 SLC22A17Q8WUG5 538 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 SGCDQ92629 289 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 EXOC2Q96KP1 924 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 HBEGFQ99075 208 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 ING2Q9H160 280 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 HCSTQ9UBK5 93 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 FAM92AA1XBS5 289 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 ABCB7O75027 752 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 CBFA2T3O75081 653 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 PRLP01236 227 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 PSMA3P25788 255 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 IL2P60568 153 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 FAM98BQ52LJ0 330 aaKnown RBP18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 CYP20A1Q6UW02 462 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 CLEC4FQ8N1N0 589 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 FAM86B1Q8N7N1 296 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 ATAD1Q8NBU5 361 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 COX4I2Q96KJ9 171 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 LHPPQ9H008 270 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 OLA1Q9NTK5 396 aaKnown RBP18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 EVLQ9UI08 416 aaPredicted RBP18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 FKBPLQ9UIM3 349 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 PCDHB5Q9Y5E4 795 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 PLXNA4Q9HCM2 1894 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 ANKRD28O15084 1053 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 EOMESO95936 686 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 CAPN1P07384 714 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 IL7RP16871 459 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 NFKBIAP25963 317 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 MTHFRP42898 656 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 PSMD7P51665 324 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 PLIN5Q00G26 463 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 TAF10Q12962 218 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 GLB1LQ6UWU2 654 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 LGI2Q8N0V4 545 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 KLHL23Q8NBE8 558 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 VWCEQ96DN2 955 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 TOR3AQ9H497 397 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 ZNF711Q9Y462 761 aa18.07■□□□□ 0.48
PCDHA1-202ENST00000394633 INPPL1O15357 1258 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 CRHBPP24387 322 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 MC4RP32245 332 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 CHRNB3Q05901 458 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 PWP1Q13610 501 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 TGFBIQ15582 683 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 LRRC26Q2I0M4 334 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 C18orf21Q32NC0 220 aaPredicted RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 IL27RAQ6UWB1 636 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 R3HCC1LQ7Z5L2 792 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 THAP5Q7Z6K1 395 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 DDHD1Q8NEL9 900 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 BPIFB6Q8NFQ5 453 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 METTL6Q8TCB7 284 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 ZNF583Q96ND8 569 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 CSF3RQ99062 836 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 CINPQ9BW66 212 aaPredicted RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 LTB4R2Q9NPC1 389 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 COMMD8Q9NX08 183 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 SMPD4Q9NXE4 827 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 SEPT3Q9UH03 358 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 TBX21Q9UL17 535 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 POLR3HQ9Y535 204 aaPredicted RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 MICAL3Q7RTP6 2002 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 C2orf81A6NN90 581 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 LSM1O15116 133 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 ZNF12P17014 697 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 IST1P53990 364 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 RAB15P59190 212 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 GNA12Q03113 381 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 NKG7Q16617 165 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 RBM48Q5RL73 367 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 DCDC5Q6ZRR9 648 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 B3GALT6Q96L58 329 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 TOX2Q96NM4 488 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 PSKH2Q96QS6 385 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 TLR8Q9NR97 1041 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 SH3GLB1Q9Y371 365 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 CORINQ9Y5Q5 1042 aa18.06■□□□□ 0.48
PCDHA1-202ENST00000394633 J3QRK9 145 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 INSIG1O15503 277 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 DFNA5O60443 496 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 HPRP00739 348 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 CD9P21926 228 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 LPOP22079 712 aaPredicted RBP18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 ITGB8P26012 769 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 SLC6A4P31645 630 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 ARL1P40616 181 aaPredicted RBP18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 MAGEA11P43364 429 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 CD97P48960 835 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 KCNQ1P51787 676 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 RING1Q06587 406 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 TUBA3CQ13748 450 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 NR6A1Q15406 480 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 GTF2IRD2BQ6EKJ0 949 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 ENPP6Q6UWR7 440 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 GTF2IRD2Q86UP8 949 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms