RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PELI3Q8N2H9 469 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 STK40Q8N2I9 435 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 CENPSQ8N2Z9 138 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 SETD9Q8NE22 299 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 MAELQ96JY0 434 aaKnown RBP15.9■□□□□ 0.14
PCDH1-203ENST00000394536 APOL4Q9BPW4 351 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 REEP1Q9H902 201 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 TRIM17Q9Y577 477 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 TARM1B6A8C7 271 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 H3BMQ9 156 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 FFAR2O15552 330 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 CDH1P12830 882 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 ITPKAP23677 461 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 IGFBP5P24593 272 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 SOAT1P35610 550 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 NEK2P51955 445 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 KPNA1P52294 538 aaPredicted RBP15.9■□□□□ 0.14
PCDH1-203ENST00000394536 MRPS15P82914 257 aaKnown RBP15.9■□□□□ 0.14
PCDH1-203ENST00000394536 KCNAB2Q13303 367 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 SERINC3Q13530 473 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 TRIM60Q495X7 471 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 HECTD3Q5T447 861 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 SULT1C3Q6IMI6 304 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 VPS37AQ8NEZ2 397 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 RAB2BQ8WUD1 216 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 ZHX1-C8orf76Q96EF9 292 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 TEX37Q96LM6 180 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 COG8Q96MW5 612 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 ATG10Q9H0Y0 220 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF556Q9HAH1 456 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 PSME2Q9UL46 239 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 A0A0U1RQF3 1178 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 TBL1XO60907 577 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 ANXA5P08758 320 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 COL6A1P12109 1028 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 HSD17B1P14061 328 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 MYF6P23409 242 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 EPS8Q12929 822 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 RAB41Q5JT25 222 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 AHSA2Q719I0 299 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 TMEM151AQ8N4L1 468 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 ITCHQ96J02 903 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 RBM4BQ9BQ04 359 aaKnown RBP15.9■□□□□ 0.14
PCDH1-203ENST00000394536 RBM4Q9BWF3 364 aaKnown RBP15.9■□□□□ 0.14
PCDH1-203ENST00000394536 VPS4AQ9UN37 437 aa15.9■□□□□ 0.14
PCDH1-203ENST00000394536 CLDN25C9JDP6 229 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 H0YJX3 145 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 K7EPI3 171 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 FDXRP22570 491 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 PBLDP30039 288 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 CORO1AP31146 461 aaKnown RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 OR1D2P34982 312 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 ADRA1AP35348 466 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SLC26A3P40879 764 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SYT16Q17RD7 645 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 CCDC92Q53HC0 331 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 LCN8Q6JVE9 175 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SH3RF2Q8TEC5 729 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 TMEM125Q96AQ2 219 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SUSD3Q96L08 255 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SLC30A3Q99726 388 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 BBS2Q9BXC9 721 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 AGPAT4Q9NRZ5 378 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 AASSQ9UDR5 926 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SPO11Q9Y5K1 396 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 LTBP3Q9NS15 1303 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 TBKBP1A7MCY6 615 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 ZNF197O14709 1029 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 ACSL4O60488 711 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 COX7A2P14406 83 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 ALDH3A2P51648 485 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 PABPC1LQ4VXU2 614 aaKnown RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SERPINA9Q86WD7 417 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 STX19Q8N4C7 294 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 POC5Q8NA72 575 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 TAMM41Q96BW9 452 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 ZNF599Q96NL3 588 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 DERL2Q9GZP9 239 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 AIG1Q9NVV5 245 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 PDP1Q9P0J1 537 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SNX8Q9Y5X2 465 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 LRRC37AA6NMS7 1700 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 MGAT4DA6NG13 374 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 UPK3BL1B0FP48 263 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 UPK3BL2E5RIL1 263 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 NDUFS2O75306 463 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 TULP3O75386 442 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 CHRNA1P02708 482 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 INAQ16352 499 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 FUBP1Q96AE4 644 aaKnown RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 L3HYPDHQ96EM0 354 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 NPLQ9BXD5 320 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 NUSAP1Q9BXS6 441 aaKnown RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 EBPLQ9BY08 206 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 REXO4Q9GZR2 422 aaKnown RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 MUC13Q9H3R2 512 aa15.89■□□□□ 0.13
PCDH1-203ENST00000394536 SCHIP1Q9P0W5 487 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-203ENST00000394536 DNAJB9Q9UBS3 223 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms