RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ING2Q9H160 280 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 GORASP2Q9H8Y8 452 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 VAPAQ9P0L0 249 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 DNMT3LQ9UJW3 386 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 CCL27Q9Y4X3 112 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 CBX4O00257 560 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 DFNA5O60443 496 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 NOL3O60936 208 aaKnown RBP18.54■□□□□ 0.56
CBX1-202ENST00000393408 KATNA1O75449 491 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 SGSHP51688 502 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 PLIN5Q00G26 463 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 NFATC3Q12968 1075 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 TRAF3Q13114 568 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 DUSP4Q13115 394 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 XAF1Q6GPH4 301 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 XKR5Q6UX68 686 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 THAP5Q7Z6K1 395 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 ADAMTSL2Q86TH1 951 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 ACDQ96AP0 544 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 C17orf80Q9BSJ5 609 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 TBC1D23Q9NUY8 699 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 TSR3Q9UJK0 312 aaKnown RBP18.54■□□□□ 0.56
CBX1-202ENST00000393408 PLXNA4Q9HCM2 1894 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 SLC38A8A6NNN8 435 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 KCNH1O95259 989 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 ATP5C1P36542 298 aaKnown RBP18.54■□□□□ 0.56
CBX1-202ENST00000393408 BNIP3Q12983 259 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 MBTPS1Q14703 1052 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 CST9Q5W186 159 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 STK40Q8N2I9 435 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 SNRNP27Q8WVK2 155 aaKnown RBP18.54■□□□□ 0.56
CBX1-202ENST00000393408 UGT2B28Q9BY64 529 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 TOR3AQ9H497 397 aa18.54■□□□□ 0.56
CBX1-202ENST00000393408 ABCB7O75027 752 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 GMNNO75496 209 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 OTCP00480 354 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 CCNA2P20248 432 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 NKG7Q16617 165 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 RBM48Q5RL73 367 aaKnown RBP18.53■□□□□ 0.56
CBX1-202ENST00000393408 ENPP6Q6UWR7 440 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 IFNL1Q8IU54 200 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 DENND1CQ8IV53 801 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 ZNF548Q8NEK5 533 aaPredicted RBP18.53■□□□□ 0.56
CBX1-202ENST00000393408 OR2T12Q8NG77 320 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 SLC22A17Q8WUG5 538 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 SLC13A3Q8WWT9 602 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 SNX19Q92543 992 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 FIG4Q92562 907 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 AURKBQ96GD4 344 aaPredicted RBP18.53■□□□□ 0.56
CBX1-202ENST00000393408 RDH12Q96NR8 316 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 IPPKQ9H8X2 491 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 FFAR2O15552 330 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 ATF6P18850 670 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 CRHBPP24387 322 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 TUBA3CQ13748 450 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 SULT1C3Q6IMI6 304 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 ZDHHC13Q8IUH4 622 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 GIPC3Q8TF64 312 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 PPP3R2Q96LZ3 170 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 DNAJB9Q9UBS3 223 aa18.53■□□□□ 0.56
CBX1-202ENST00000393408 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 G3V2T6 193 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 PRMT5O14744 637 aaPredicted RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 GJB5O95377 273 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 S100BP04271 92 aaPredicted RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 HNRNPCP07910 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
CBX1-202ENST00000393408 CKBP12277 381 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 UGT1A1P22309 533 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 UGT1A4P22310 534 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 MAP4P27816 1152 aaKnown RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 UGT1A3P35503 534 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 UGT1A5P35504 534 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 CACNG1Q06432 222 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 ZNF177Q13360 481 aaPredicted RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 MOGQ16653 247 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 TRAF7Q6Q0C0 670 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 NECAB2Q7Z6G3 386 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 MILR1Q7Z6M3 343 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 C8orf59Q8N0T1 100 aaPredicted RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 CHCHD4Q8N4Q1 142 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 FBXO30Q8TB52 745 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 GTF2H4Q92759 462 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 CDK5RAP1Q96SZ6 601 aaKnown RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 MBOAT4Q96T53 435 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 TTLL2Q9BWV7 592 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 FAM118AQ9NWS6 357 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 IL17CQ9P0M4 197 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 EVLQ9UI08 416 aaPredicted RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 ZMYM5Q9UJ78 669 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 GABRQQ9UN88 632 aa18.52■□□□□ 0.56
CBX1-202ENST00000393408 TDRKHQ9Y2W6 561 aaKnown RBP18.52■□□□□ 0.56
CBX1-202ENST00000393408 TBC1D4O60343 1298 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 CD160O95971 181 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 KLKB1P03952 638 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 SLC2A4P14672 509 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 ZNF182P17025 639 aaPredicted RBP18.52■□□□□ 0.55
CBX1-202ENST00000393408 MAPK10P53779 464 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 IST1P53990 364 aa18.52■□□□□ 0.55
CBX1-202ENST00000393408 RPL38P63173 70 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms