RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 AASDHPPTQ9NRN7 309 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 HS3ST3A1Q9Y663 406 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 PRSS21Q9Y6M0 314 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 CACNA1EQ15878 2313 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 A0A1B0GVT2 93 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 H0Y8X5 98 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 H3BMM5 538 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 ARHGAP33O14559 1287 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 RECQL5O94762 991 aaPredicted RBP13.36□□□□□ -0.27
PTN-202ENST00000393083 SERPINE1P05121 402 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 SBK3P0C264 359 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 CD1DP15813 335 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 ENGP17813 658 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 TFEBP19484 476 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 CHRM3P20309 590 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 CD9P21926 228 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 CLDN2P57739 230 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 GRIK2Q13002 908 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 STX3Q13277 289 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 ACAP2Q15057 778 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 TEAD4Q15561 434 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 WSCD2Q2TBF2 565 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 GPRC6AQ5T6X5 926 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 UGT3A1Q6NUS8 523 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 PAQR3Q6TCH7 311 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 OTOAQ7RTW8 1153 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 PIGWQ7Z7B1 504 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 IQCHQ86VS3 1027 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 KIAA2013Q8IYS2 634 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 NRSN1Q8IZ57 195 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 CACNA2D3Q8IZS8 1091 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 TMEM151AQ8N4L1 468 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 GIMAP7Q8NHV1 300 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 CD200R1Q8TD46 325 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 DTD2Q96FN9 168 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 COPS8Q99627 209 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 SLC30A3Q99726 388 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 ZSCAN5AQ9BUG6 496 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 MBNL1Q9NR56 388 aaKnown RBP13.36□□□□□ -0.27
PTN-202ENST00000393083 SMOXQ9NWM0 555 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 GALPQ9UBC7 116 aa13.36□□□□□ -0.27
PTN-202ENST00000393083 POM121BA6NF01 834 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 IQCF5A8MTL0 148 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 TARM1B6A8C7 271 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 TLR4O00206 839 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 CDX4O14627 284 aaPredicted RBP13.35□□□□□ -0.27
PTN-202ENST00000393083 ZBTB14O43829 449 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 LZTS3O60299 673 aaPredicted RBP13.35□□□□□ -0.27
PTN-202ENST00000393083 GDF9O60383 454 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 SNX3O60493 162 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 RBP1P09455 135 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 RALBP11234 206 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 ITGB6P18564 788 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 AKT1P31749 480 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 NSG1P42857 185 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 OVGP1Q12889 678 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 ZSCAN26Q16670 478 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 CES4AQ5XG92 561 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 NKAPQ8N5F7 415 aaKnown RBP13.35□□□□□ -0.27
PTN-202ENST00000393083 CCDC197Q8NCU1 140 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 LKAAEAR1Q8TD35 194 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 DTX3LQ8TDB6 740 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 NAT14Q8WUY8 206 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 AP2M1Q96CW1 435 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 NUS1Q96E22 293 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 SGF29Q96ES7 293 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 ALG9Q9H6U8 611 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 GPR27Q9NS67 375 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 TMPRSS11EQ9UL52 423 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 SNX11Q9Y5W9 270 aa13.35□□□□□ -0.27
PTN-202ENST00000393083 IGLV3-16A0A075B6K0 115 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 FADS2P1A8MWK0 482 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 TRIM13O60858 407 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 SNNO75324 88 aaPredicted RBP13.34□□□□□ -0.27
PTN-202ENST00000393083 H2AFYO75367 372 aaKnown RBP13.34□□□□□ -0.27
PTN-202ENST00000393083 SYPP08247 313 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 GRK2P25098 689 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 IGFALSP35858 605 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 SKIV2L2P42285 1042 aaKnown RBP13.34□□□□□ -0.27
PTN-202ENST00000393083 CTSKP43235 329 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 CLCN7P51798 805 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 PFN3P60673 137 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 IRF4Q15306 451 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 LIPMQ5VYY2 423 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 FOXR1Q6PIV2 292 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 MACC1Q6ZN28 852 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
PTN-202ENST00000393083 RAVER1Q8IY67 606 aaKnown RBP13.34□□□□□ -0.27
PTN-202ENST00000393083 CPNE9Q8IYJ1 553 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 CLDN19Q8N6F1 224 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 OR13H1Q8NG92 308 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 PTERQ96BW5 349 aa13.34□□□□□ -0.27
PTN-202ENST00000393083 LINGO1Q96FE5 620 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms