RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 SUMF1Q8NBK3 374 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 EEF1AKMT1Q8WVE0 214 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 ANKRD49Q8WVL7 239 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 ASZ1Q8WWH4 475 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 TCEAL3Q969E4 200 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 ISL2Q96A47 359 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 TMEM159Q96B96 161 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 PGM2Q96G03 612 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 LRRC61Q9BV99 259 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 CAPN10Q9HC96 672 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 LATS2Q9NRM7 1088 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 TRNAU1APQ9NX07 287 aaKnown RBP16.71■□□□□ 0.27
ERCC2-202ENST00000391942 SLC6A14Q9UN76 642 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 PSMD13Q9UNM6 376 aa16.71■□□□□ 0.27
ERCC2-202ENST00000391942 NOVA2Q9UNW9 492 aaKnown RBP16.71■□□□□ 0.27
ERCC2-202ENST00000391942 C17orf113A0A1B0GUU1 675 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 SLC5A10A0PJK1 596 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 LIN7AO14910 233 aaPredicted RBP16.7■□□□□ 0.26
ERCC2-202ENST00000391942 OPA1O60313 960 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 TOP3BO95985 862 aaKnown RBP16.7■□□□□ 0.26
ERCC2-202ENST00000391942 MPOP05164 745 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 CCDC166P0CW27 439 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 ZNF37AP17032 561 aaPredicted RBP16.7■□□□□ 0.26
ERCC2-202ENST00000391942 RPL10P27635 214 aaKnown RBP16.7■□□□□ 0.26
ERCC2-202ENST00000391942 ACTR1BP42025 376 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 ACTR1AP61163 376 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 ILF3Q12906 894 aaKnown RBP eCLIP16.7■□□□□ 0.26
ERCC2-202ENST00000391942 TTLL9Q3SXZ7 439 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 PLEKHS1Q5SXH7 462 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 SLC23A3Q6PIS1 610 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 NRROSQ86YC3 692 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 OR2I1PQ8NGU4 316 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 LMX1AQ8TE12 382 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 SKA2Q8WVK7 121 aaPredicted RBP16.7■□□□□ 0.26
ERCC2-202ENST00000391942 LINGO1Q96FE5 620 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 SH3GL2Q99962 352 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 POPDC3Q9HBV1 291 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 GMEB2Q9UKD1 530 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
ERCC2-202ENST00000391942 CDYLQ9Y232 598 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 ACOT9Q9Y305 439 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 PCDHGA5Q9Y5G8 931 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 KNL1Q8NG31 2342 aa16.7■□□□□ 0.26
ERCC2-202ENST00000391942 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 H3BM21 787 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 GPC4O75487 556 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 WISP3O95389 354 aaPredicted RBP16.69■□□□□ 0.26
ERCC2-202ENST00000391942 GSTM1P09488 218 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 CREB1P16220 341 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 KRT4P19013 534 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 CSRP3P50461 194 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 IL2P60568 153 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 HNRNPKP61978 463 aaKnown RBP eCLIP16.69■□□□□ 0.26
ERCC2-202ENST00000391942 IRX4P78413 519 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 GSTM4Q03013 218 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 LRP8Q14114 963 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 CSHL1Q14406 222 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 HLA-BQ31612 363 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 PIWIL4Q7Z3Z4 852 aaKnown RBP16.69■□□□□ 0.26
ERCC2-202ENST00000391942 TAF8Q7Z7C8 310 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 TBC1D1Q86TI0 1168 aaPredicted RBP16.69■□□□□ 0.26
ERCC2-202ENST00000391942 KCTD4Q8WVF5 259 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 ELF4Q99607 663 aaPredicted RBP16.69■□□□□ 0.26
ERCC2-202ENST00000391942 ERVMER34-1Q9H9K5 563 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 IL21RQ9HBE5 538 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 SYTL2Q9HCH5 934 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 PRDM8Q9NQV8 689 aa16.69■□□□□ 0.26
ERCC2-202ENST00000391942 ZFC3H1O60293 1989 aaKnown RBP16.69■□□□□ 0.26
ERCC2-202ENST00000391942 A0A087X1B8 175 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 PDZK1P1A8MUH7 402 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 ATP8B1O43520 1251 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 IDSP22304 550 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 DGKAP23743 735 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 ATP5DP30049 168 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 RGS4P49798 205 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 CLCNKAP51800 687 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 DMPKQ09013 629 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 DLG1Q12959 904 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 ABRQ12979 859 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 BNIP3Q12983 259 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 GBX1Q14549 363 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 TTMPQ5BVD1 217 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 TNFAIP8L3Q5GJ75 292 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 METRNLQ641Q3 311 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 EXOC3L1Q86VI1 746 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 PLD6Q8N2A8 252 aaKnown RBP16.68■□□□□ 0.26
ERCC2-202ENST00000391942 ZNF548Q8NEK5 533 aaPredicted RBP16.68■□□□□ 0.26
ERCC2-202ENST00000391942 SPDYE1Q8NFV5 336 aaPredicted RBP16.68■□□□□ 0.26
ERCC2-202ENST00000391942 CFAP61Q8NHU2 1237 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 GPBAR1Q8TDU6 330 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 GLMNQ92990 594 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 NXNL1Q96CM4 212 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 PKNOX2Q96KN3 472 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 GTPBP2Q9BX10 602 aaKnown RBP16.68■□□□□ 0.26
ERCC2-202ENST00000391942 NUSAP1Q9BXS6 441 aaKnown RBP16.68■□□□□ 0.26
ERCC2-202ENST00000391942 GSDMCQ9BYG8 508 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 WWP1Q9H0M0 922 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 STMN4Q9H169 189 aaPredicted RBP16.68■□□□□ 0.26
ERCC2-202ENST00000391942 IRF2BPLQ9H1B7 796 aa16.68■□□□□ 0.26
ERCC2-202ENST00000391942 GAREM1Q9H706 876 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms