RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 GPR182O15218 404 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CACNG3O60359 315 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 DNTTP04053 509 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 SPNP16150 400 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CD40LGP29965 261 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ALDH7A1P49419 539 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 ST13P50502 369 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 CTF1Q16619 201 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 SLC22A15Q8IZD6 547 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 OR10T2Q8NGX3 314 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 TRIB2Q92519 343 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 PROX1Q92786 737 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 DEPDC7Q96QD5 511 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ENTPD7Q9NQZ7 604 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ADGRE2Q9UHX3 823 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 IFT52Q9Y366 437 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ZFC3H1O60293 1989 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 LOC100130705A0A1B0GUX0 176 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 GOT2P00505 430 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 POMCP01189 267 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CYBBP04839 570 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ALPLP05186 524 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CD52P31358 61 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 PIK3CGP48736 1102 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 PGFP49763 221 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 POLR2JP52435 117 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 TUBA3CQ13748 450 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 PAN2Q504Q3 1202 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 AHSA2Q719I0 299 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 DET1Q7L5Y6 550 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 MMAAQ8IVH4 418 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CELF2-AS1Q8N7Q2 184 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 FAR1Q8WVX9 515 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 STON2Q8WXE9 905 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 KLHL5Q96PQ7 755 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 AMBRA1Q9C0C7 1298 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 SMOC2Q9H3U7 446 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 RMND5AQ9H871 391 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 AKIP1Q9NQ31 210 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 MRGBPQ9NV56 204 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 C14orf119Q9NWQ9 140 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 A0A0U1RQF3 1178 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 A0A1W2PP18 115 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ADAMTS4O75173 837 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ITGB1P05556 798 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 HRH2P25021 359 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 FMO4P31512 558 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CCR1P32246 355 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CLK3P49761 638 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 CSRP3P50461 194 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ZNF135P52742 658 aaPredicted RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 TRAF3Q13114 568 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 CRHR2Q13324 411 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 TFAP2DQ7Z6R9 452 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 OR13J1Q8NGT2 312 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 SCAMP5Q8TAC9 235 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ZNF419Q96HQ0 510 aaPredicted RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 ABCG8Q9H221 673 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 TUBB1Q9H4B7 451 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ZBTB20Q9HC78 741 aaPredicted RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 NT5MQ9NPB1 228 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 COMMD8Q9NX08 183 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 ADPRHL2Q9NX46 363 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 DNMT3BQ9UBC3 853 aaKnown RBP13.66□□□□□ -0.22
SDC1-202ENST00000381150 RNF112Q9ULX5 631 aa13.66□□□□□ -0.22
SDC1-202ENST00000381150 TTC3P53804 2025 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 FAM20BO75063 409 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 B3GAT3O94766 335 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 CD36P16671 472 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 IL12AP29459 219 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 AGTR2P50052 363 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 GCNT7Q6ZNI0 430 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 BEND5Q7L4P6 421 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 TSPAN17Q96FV3 270 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 DUS3LQ96G46 650 aaKnown RBP13.65□□□□□ -0.22
SDC1-202ENST00000381150 TTYH2Q9BSA4 534 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 DSN1Q9H410 356 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 NTN4Q9HB63 628 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 PAK1IP1Q9NWT1 392 aaPredicted RBP13.65□□□□□ -0.22
SDC1-202ENST00000381150 MPP6Q9NZW5 540 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 PCDHA9Q9Y5H5 950 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 HTTP42858 3142 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 F8W810 466 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 BCKDKO14874 412 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 RGS5O15539 181 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 MTSS1O43312 755 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 PRKD3O94806 890 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 ZNF682O95780 498 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 ANXA6P08133 673 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 ODC1P11926 461 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 DNAJB13P59910 316 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 IFITM2Q01629 132 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 RAPSNQ13702 412 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 RBM48Q5RL73 367 aaKnown RBP13.65□□□□□ -0.22
SDC1-202ENST00000381150 STEAP3Q658P3 488 aa13.65□□□□□ -0.22
SDC1-202ENST00000381150 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms