RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ZNF624Q9P2J8 865 aaPredicted RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 ATXN7L1Q9ULK2 861 aaPredicted RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 NFU1Q9UMS0 254 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 NEUROG3Q9Y4Z2 214 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 CFAP20Q9Y6A4 193 aaKnown RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 PRAMEF33A0A0G2JMD5 474 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 A0A1W2PQM1 296 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 QSOX1O00391 747 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 B4GAT1O43505 415 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 PNLIPP16233 465 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 SLC19A1P41440 591 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 PREPP48147 710 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 CSE1LP55060 971 aaKnown RBP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 EIF3BP55884 814 aaKnown RBP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 CAV1Q03135 178 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 PDIA2Q13087 525 aaKnown RBP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 TARDBPQ13148 414 aaKnown RBP eCLIP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 BOP1Q14137 746 aaKnown RBP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 CRYMQ14894 314 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 SYTL3Q4VX76 610 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 NKAIN2Q5VXU1 208 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 ZNF470Q6ECI4 717 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 PTRHD1Q6GMV3 140 aaKnown RBP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 EMBQ6PCB8 327 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 WASH2PQ6VEQ5 465 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 RBM44Q6ZP01 1051 aaKnown RBP18.99■□□□□ 0.63
GTF3A-201ENST00000381140 USP53Q70EK8 1073 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 ZNF438Q7Z4V0 828 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 UNC5BQ8IZJ1 945 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 KRT222Q8N1A0 295 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 C12orf66Q96MD2 445 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 DEPDC7Q96QD5 511 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 COG4Q9H9E3 785 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 WASH6PQ9NQA3 447 aa18.99■□□□□ 0.63
GTF3A-201ENST00000381140 KLHL33A6NCF5 533 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 IQCF5A8MTL0 148 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 F8W8V4 182 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 PRMT5O14744 637 aaPredicted RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 PFDN6O15212 129 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 TP73O15350 636 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 ZW10O43264 779 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 CSO75390 466 aaKnown RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 XRCC1P18887 633 aaPredicted RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 UBE2IP63279 158 aaKnown RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 SHC2P98077 582 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 RPE65Q16518 533 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 CDCP2Q5VXM1 449 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 DUS1LQ6P1R4 473 aaKnown RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 ZNF449Q6P9G9 518 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 GSPT2Q8IYD1 628 aaKnown RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 AVL9Q8NBF6 648 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 SPDYE1Q8NFV5 336 aaPredicted RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 LKAAEAR1Q8TD35 194 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 SH3KBP1Q96B97 665 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 AHCYL2Q96HN2 611 aaKnown RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 RMDN2Q96LZ7 410 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 RDH14Q9HBH5 336 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 ZC3H7BQ9UGR2 993 aaKnown RBP18.98■□□□□ 0.63
GTF3A-201ENST00000381140 ACSL5Q9ULC5 683 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 FAM169AQ9Y6X4 670 aa18.98■□□□□ 0.63
GTF3A-201ENST00000381140 C17orf113A0A1B0GUU1 675 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 AGRPO00253 132 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 OGNP20774 298 aaKnown RBP18.97■□□□□ 0.63
GTF3A-201ENST00000381140 FMO4P31512 558 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 GPR3P46089 330 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 PLTPP55058 493 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 CTBP1Q13363 440 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 TYSND1Q2T9J0 566 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 HSP90AA5PQ58FG0 334 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 SPANXN3Q5MJ09 141 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 BEND6Q5SZJ8 279 aaPredicted RBP18.97■□□□□ 0.63
GTF3A-201ENST00000381140 XKR5Q6UX68 686 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 KCNMB4Q86W47 210 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 DENND6AQ8IWF6 608 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 GPR150Q8NGU9 434 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 WDR48Q8TAF3 677 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 FBXO25Q8TCJ0 367 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 CAVIN3Q969G5 261 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 INSM2Q96T92 566 aaPredicted RBP18.97■□□□□ 0.63
GTF3A-201ENST00000381140 NAT9Q9BTE0 207 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 TSSK1BQ9BXA7 367 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 TBC1D10AQ9BXI6 508 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 FOXP3Q9BZS1 431 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 IARS2Q9NSE4 1012 aaKnown RBP18.97■□□□□ 0.63
GTF3A-201ENST00000381140 GNPTGQ9UJJ9 305 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 CRYL1Q9Y2S2 319 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 MSRB2Q9Y3D2 182 aa18.97■□□□□ 0.63
GTF3A-201ENST00000381140 D6RAR5 112 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 TTC4O95801 387 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 ERVK-10P10266 1014 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 MTHFD1P11586 935 aaKnown RBP18.96■□□□□ 0.63
GTF3A-201ENST00000381140 PDHA2P29803 388 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 KRT33BQ14525 404 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 NR1D2Q14995 579 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 FASTKD3Q14CZ7 662 aaKnown RBP18.96■□□□□ 0.63
GTF3A-201ENST00000381140 RNF187Q5TA31 235 aaPredicted RBP18.96■□□□□ 0.63
GTF3A-201ENST00000381140 UNC5AQ6ZN44 842 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 CENPUQ71F23 418 aa18.96■□□□□ 0.63
GTF3A-201ENST00000381140 CILP2Q8IUL8 1156 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms