RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 OR4K17Q8NGC6 315 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 C11orf24Q96F05 449 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 BLOC1S4Q9NUP1 217 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 TMEM51Q9NW97 253 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 ASTN1O14525 1302 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 H0YGN5 161 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 MEIS2O14770 477 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 CPNE3O75131 537 aaKnown RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 GOT2P00505 430 aaKnown RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 PTNP21246 168 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 RNF144AP50876 292 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 POLR2JP52435 117 aaKnown RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 CD47Q08722 323 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SMARCB1Q12824 385 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 RAB39AQ14964 217 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 BMT2Q1RMZ1 405 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 ABCA11PQ4W5N1 156 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 BAP1Q92560 729 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 MR1Q95460 341 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 KLRG1Q96E93 195 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 POLR3BQ9NW08 1133 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 TRAF6Q9Y4K3 522 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 MFSD11O43934 449 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 PRH1P02810 166 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SPRYD7Q5W111 196 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 CWF19L1Q69YN2 538 aaKnown RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 NLGN4XQ8N0W4 816 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 GLOD4Q9HC38 313 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 FBXO5Q9UKT4 447 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 GPR89AB7ZAQ6 455 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 PDPK1O15530 556 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 CHRM5P08912 532 aaPredicted RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 GPR89BP0CG08 455 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 ADSSP30520 456 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 PSMD7P51665 324 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SLC9B1Q4ZJI4 515 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 DCST1Q5T197 706 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SPPL2CQ8IUH8 684 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 CERS5Q8N5B7 392 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 PIK3C3Q8NEB9 887 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 JOSD2Q8TAC2 188 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 STYXQ8WUJ0 223 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 PTCD3Q96EY7 689 aaKnown RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SERINC1Q9NRX5 453 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 RIPK3Q9Y572 518 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 PCDHB1Q9Y5F3 818 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SNX4O95219 450 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 CXCR1P25024 350 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 IL12AP29459 219 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 CDH4P55283 916 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 MXD1Q05195 221 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 ZNF844Q08AG5 666 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 ODF4Q2M2E3 257 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SPATC1Q76KD6 591 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 ZFRQ96KR1 1074 aaKnown RBP13.93□□□□□ -0.18
TRIM13-202ENST00000378182 RENP00797 406 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 HEXBP07686 556 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 VSTM1Q6UX27 236 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 SYVN1Q86TM6 617 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 TREML1Q86YW5 311 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 ZNF570Q96NI8 536 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 FTSJ1Q9UET6 329 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 UBIAD1Q9Y5Z9 338 aa13.93□□□□□ -0.18
TRIM13-202ENST00000378182 COL1A2P08123 1366 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 LOC110117498-PIK3R3F6TDL0 507 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 MUSKO15146 869 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 CYP1A2P05177 515 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 MPSTP25325 297 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 EOGTQ5NDL2 527 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 SLC9A4Q6AI14 798 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 PYROXD2Q8N2H3 581 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 IL22RA1Q8N6P7 574 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 PIK3R3Q92569 461 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 DUSP9Q99956 384 aaKnown RBP13.92□□□□□ -0.18
TRIM13-202ENST00000378182 SMIM28A0A1B0GU29 152 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 ELOA3DA6NLF2 546 aaPredicted RBP13.92□□□□□ -0.18
TRIM13-202ENST00000378182 MT-ND1P03886 318 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 UROSP10746 265 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 ECHS1P30084 290 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 CASP6P55212 293 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 ATP6V0D1P61421 351 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 GNA12Q03113 381 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 ELOA3BQ3SY89 546 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 ECHDC2Q86YB7 292 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 AADATQ8N5Z0 425 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 DBF4BQ8NFT6 615 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 ELOA3Q8NG57 546 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 NXNL1Q96CM4 212 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 SIPA1Q96FS4 1042 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 CHID1Q9BWS9 393 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 KCNK4Q9NYG8 393 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIM13-202ENST00000378182 PAPSS2O95340 614 aaPredicted RBP13.92□□□□□ -0.18
TRIM13-202ENST00000378182 FCER2P06734 321 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 GTF2BQ00403 316 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 RASGEF1BQ0VAM2 473 aa13.92□□□□□ -0.18
TRIM13-202ENST00000378182 PIWIL2Q8TC59 973 aaKnown RBP13.92□□□□□ -0.18
TRIM13-202ENST00000378182 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms