RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 WNT9AO14904 365 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ZBTB39O15060 712 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 IL3P08700 152 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ARSFP54793 590 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 MBOAT1Q6ZNC8 495 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 KSR1Q8IVT5 923 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RHOXF1Q8NHV9 184 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 KCNV2Q8TDN2 545 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SLC35B4Q969S0 331 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 UBXN10Q96LJ8 280 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 MUC3BQ9H195 1237 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 A0A096LPI6 279 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TPD52L2O43399 206 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ENTPD6O75354 484 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ITGAXP20702 1163 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FAM136AQ96C01 138 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CLRN2A0PK11 232 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 E7ENX8 843 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 DNTTP04053 509 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TPTEP56180 551 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RPL6Q02878 288 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 NR6A1Q15406 480 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PNCKQ6P2M8 343 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CHST15Q7LFX5 561 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 IMP4Q96G21 291 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CSNK1G1Q9HCP0 422 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FLRT1Q9NZU1 646 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SERTM1A2A2V5 107 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 GRID2O43424 1007 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 S100A9P06702 114 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ATP6V1B2P21281 511 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ZNHIT3Q15649 155 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SNX20Q7Z614 316 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FGD2Q7Z6J4 655 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FAM47BQ8NA70 645 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 GLTPQ9NZD2 209 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF879B4DU55 563 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FPR1P21462 350 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 AGTR1P30556 359 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 UGT1A5P35504 534 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TRAF2Q12933 501 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 MPPE1Q53F39 396 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 DAW1Q8N136 415 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 GEMIN6Q8WXD5 167 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PABPC5Q96DU9 382 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF764Q96H86 408 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FEM1AQ9BSK4 669 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TYRP14679 529 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 OR6J1Q8NGC5 347 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 APOC1P02654 83 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 NR4A2P43354 598 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RAB2AP61019 212 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PTPN20Q4JDL3 420 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 LRRC71Q8N4P6 559 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 BPIFB6Q8NFQ5 453 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 GATAD2BQ8WXI9 593 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PIRO00625 290 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 QPRTQ15274 297 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 IQCCQ4KMZ1 466 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PSD2Q9BQI7 771 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 KLQ9UEF7 1012 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CLTCQ00610 1675 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SULT1C4O75897 302 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FRG2Q64ET8 278 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 KIAA1211LQ6NV74 962 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 KIAA1324Q6UXG2 1013 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FRG2BQ96QU4 278 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SPTLC1O15269 473 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 VEGFDO43915 354 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 LGI1O95970 557 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SIX1Q15475 284 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 NIPAL2Q9H841 368 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 CHI3L1P36222 383 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ECT2LQ008S8 904 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PROKR2Q8NFJ6 384 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SGCDQ92629 289 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 MND1Q9BWT6 205 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 XYLT2Q9H1B5 865 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SLC25A13Q9UJS0 675 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 TEX51A0A1B0GUA7 166 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 NOBOXO60393 691 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RSL1D1O76021 490 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 WDPCPO95876 746 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ANKRD26P1Q6NSI1 321 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 LRRN1Q6UXK5 716 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PRR23D1E9PI22 279 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PRR23D2P0DMB1 279 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SMSP52788 366 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 PTCHD4Q6ZW05 846 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ANKRD13BQ86YJ7 626 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SERAC1Q96JX3 654 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SNPHO15079 494 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SLC25A11Q02978 314 aaKnown RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 RNF135Q8IUD6 432 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 KIAA0319LQ8IZA0 1049 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF214Q9UL59 606 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 IGFBP5P24593 272 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 SYTL3Q4VX76 610 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FAM131BQ86XD5 332 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 LPCAT1Q8NF37 534 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms