RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ATP1B2P14415 290 aaPredicted RBP13.9□□□□□ -0.19
NELFE-201ENST00000375425 FOLR1P15328 257 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 OAS2P29728 719 aaKnown RBP13.9□□□□□ -0.19
NELFE-201ENST00000375425 ZNF140P52738 457 aaPredicted RBP13.9□□□□□ -0.19
NELFE-201ENST00000375425 GSE1Q14687 1217 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 KCNAB1Q14722 419 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 PARP6Q2NL67 630 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 DEFB109BQ30KR1 87 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.19
NELFE-201ENST00000375425 ATP1A1-AS1Q5TC04 95 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 DUS1LQ6P1R4 473 aaKnown RBP13.9□□□□□ -0.19
NELFE-201ENST00000375425 ATG14Q6ZNE5 492 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 KLHDC8BQ8IXV7 354 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 NXPE1Q8N323 547 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 LILRA3Q8N6C8 439 aaPredicted RBP13.9□□□□□ -0.19
NELFE-201ENST00000375425 UBL4BQ8N7F7 174 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 FAM71DQ8N9W8 422 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 SIDT2Q8NBJ9 832 aaKnown RBP13.9□□□□□ -0.19
NELFE-201ENST00000375425 TTC13Q8NBP0 860 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 ZFPM2Q8WW38 1151 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 ULK4Q96C45 1275 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 LRRC45Q96CN5 670 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 STAMBPL1Q96FJ0 436 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 COPS8Q99627 209 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 C19orf43Q9BQ61 176 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 TRIM4Q9C037 500 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 PDE7BQ9NP56 450 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 FEZ2Q9UHY8 353 aaPredicted RBP13.9□□□□□ -0.19
NELFE-201ENST00000375425 CROTQ9UKG9 612 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 PADI1Q9ULC6 663 aa13.9□□□□□ -0.19
NELFE-201ENST00000375425 COL12A1Q99715 3063 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 RELNP78509 3460 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 A0A0U1RQJ8 604 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 UBA6A0AVT1 1052 aaPredicted RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 OR6C74A6NCV1 312 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 GOLGA6L9A6NEM1 432 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 GOLGA6L3A6NEY3 463 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 ZNF189O75820 626 aaPredicted RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 TIAF1O95411 115 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 METTL18O95568 372 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 CCNYL3P0C7X3 344 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 TPH1P17752 444 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 ITGALP20701 1170 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 CDKN1CP49918 316 aaPredicted RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 TUBB3Q13509 450 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 CRTC2Q53ET0 693 aaPredicted RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 DNTTIP2Q5QJE6 756 aaKnown RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 KCTD11Q693B1 232 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 CAPRIN2Q6IMN6 1127 aaKnown RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 PWWP2BQ6NUJ5 590 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 CYB5D1Q6P9G0 228 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 CERS6Q6ZMG9 384 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 ARHGEF18Q6ZSZ5 1173 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 GAS2L3Q86XJ1 694 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 PTRH1Q86Y79 214 aaKnown RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 TMEM139Q8IV31 216 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 SYCE1Q8N0S2 351 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 APOBEC4Q8WW27 367 aaKnown RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 DNAJC1Q96KC8 554 aaKnown RBP13.89□□□□□ -0.19
NELFE-201ENST00000375425 KIR3DX1Q9H7L2 352 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 SLC24A2Q9UI40 661 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 TUBD1Q9UJT1 453 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 RARRES3Q9UL19 164 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 PCDHB3Q9Y5E6 796 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 COLEC10Q9Y6Z7 277 aa13.89□□□□□ -0.19
NELFE-201ENST00000375425 C17orf113A0A1B0GUU1 675 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 MIF4GDA9UHW6 222 aaKnown RBP13.88□□□□□ -0.19
NELFE-201ENST00000375425 CFAP99D6REC4 459 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 TERTO14746 1132 aaKnown RBP13.88□□□□□ -0.19
NELFE-201ENST00000375425 DDX3YO15523 660 aaKnown RBP13.88□□□□□ -0.19
NELFE-201ENST00000375425 KATNA1O75449 491 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 FTCDO95954 541 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 SLC35G4P0C7Q5 338 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 EBLN1P0CF75 366 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 MC4RP32245 332 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 PRLHRP49683 370 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 ARL4DP49703 201 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 HSD11B2P80365 405 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 ACY1Q03154 408 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 KLF1Q13351 362 aaPredicted RBP13.88□□□□□ -0.19
NELFE-201ENST00000375425 ERV3-1Q14264 604 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 KRT33BQ14525 404 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 ZRANB3Q5FWF4 1079 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 MICALCLQ6ZW33 695 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 BPHLQ86WA6 291 aaPredicted RBP13.88□□□□□ -0.19
NELFE-201ENST00000375425 OOSP2Q86WS3 158 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 KMT5CQ86Y97 462 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 OR4E2Q8NGC2 313 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 HEXDCQ8WVB3 486 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 RMDN2Q96LZ7 410 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 CD180Q99467 661 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 DESI2Q9BSY9 194 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 TMEM121Q9BTD3 319 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 CLMPQ9H6B4 373 aa13.88□□□□□ -0.19
NELFE-201ENST00000375425 R3HDM2Q9Y2K5 976 aaKnown RBP13.88□□□□□ -0.19
NELFE-201ENST00000375425 TCRBV7S2A1N4TA0A589 114 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 TLCD2A6NGC4 264 aa13.87□□□□□ -0.19
NELFE-201ENST00000375425 MT-ND3P03897 115 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms