RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 GPR89AB7ZAQ6 455 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 DNAJB5O75953 348 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 GPR89BP0CG08 455 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZNF8P17098 575 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 ADRA1AP35348 466 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 SLC19A1P41440 591 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 PGDP52209 483 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 PARP6Q2NL67 630 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 P3H1Q32P28 736 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 CACHD1Q5VU97 1274 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 PRSS42Q7Z5A4 293 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 SLC13A5Q86YT5 568 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 CT55Q8WUE5 264 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 THAP4Q8WY91 577 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 ATG4AQ8WYN0 398 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 KLHL6Q8WZ60 621 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZDHHC12Q96GR4 267 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 VPS35Q96QK1 796 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 APOL2Q9BQE5 337 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 TMEM121Q9BTD3 319 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 TRIM39Q9HCM9 518 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 ARFGAP3Q9NP61 516 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 IL17CQ9P0M4 197 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 SCHIP1Q9P0W5 487 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 PPP2R2CQ9Y2T4 447 aa18.79■□□□□ 0.6
TRAPPC3-204ENST00000373166 GLYATL1P3A0A0U1RQE8 302 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 STX7O15400 261 aaKnown RBP18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 GDF10P55107 478 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 FAM151BQ6UXP7 276 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 RANBP10Q6VN20 620 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 GDAP1Q8TB36 358 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 GPR87Q9BY21 358 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 TRIM55Q9BYV6 548 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 ACTL8Q9H568 366 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 PDE7BQ9NP56 450 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZNF624Q9P2J8 865 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 MAP4K5Q9Y4K4 846 aa18.78■□□□□ 0.6
TRAPPC3-204ENST00000373166 C2orf81A6NN90 581 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 PDZK1P1A8MUH7 402 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 BUD23O43709 281 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 LIASO43766 372 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 KIF1CO43896 1103 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 VEGFDO43915 354 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 SEMA7AO75326 666 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 CAPZBP47756 277 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 OLIG2Q13516 323 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 ITGA9Q13797 1035 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 GTF2H3Q13889 308 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 TAF1AQ15573 450 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 INSCQ1MX18 579 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 ATP13A5Q4VNC0 1218 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZNF648Q5T619 568 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 CRTC3Q6UUV7 619 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 ADGRG6Q86SQ4 1221 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 RBM12BQ8IXT5 1001 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 DTX3LQ8TDB6 740 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 SLC25A23Q9BV35 468 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZCCHC2Q9C0B9 1178 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 LRRC40Q9H9A6 602 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 IL26Q9NPH9 171 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 POT1Q9NUX5 634 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 ARL5AQ9Y689 179 aa18.77■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZNF106Q9H2Y7 1883 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 KMOO15229 486 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 MTX2O75431 263 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 CRTAMO95727 393 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 NELFEP18615 380 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 LPOP22079 712 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 PDE1BQ01064 536 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 SPARCL1Q14515 664 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 SEPT7Q16181 437 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT8Q16880 541 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 NADK2Q4G0N4 442 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 IRGCQ6NXR0 463 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 FAM92BQ6ZTR7 304 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 RSC1A1Q92681 617 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 FCRL4Q96PJ5 515 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 SLC40A1Q9NP59 571 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 EPHA6Q9UF33 1036 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 SLC23A2Q9UGH3 650 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 RARRES3Q9UL19 164 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 ZNF148Q9UQR1 794 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 DNAJC16Q9Y2G8 782 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 PCDHGA9Q9Y5G4 932 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 ICE1Q9Y2F5 2266 aa18.76■□□□□ 0.59
TRAPPC3-204ENST00000373166 CHUKO15111 745 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 PSMD3O43242 534 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 CDK14O94921 469 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 METTL18O95568 372 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 DDAH2O95865 285 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 ZNF7P17097 686 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 PTPN4P29074 926 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 STIP1P31948 543 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 RPS15P62841 145 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 TUBB3Q13509 450 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 OASLQ15646 514 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 CHRNA6Q15825 494 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 PLA2G4EQ3MJ16 856 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 ABRAXAS1Q6UWZ7 409 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms