RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 MARCH5Q9NX47 278 aa12.55□□□□□ -0.4
CTPS1-202ENST00000372621 HTTP42858 3142 aa12.55□□□□□ -0.4
CTPS1-202ENST00000372621 GJB5O95377 273 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CNPP09543 421 aaKnown RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 TMBIM6P55061 237 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 NR6A1Q15406 480 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF829Q3KNS6 432 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ANKRD26P1Q6NSI1 321 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 NCEH1Q6PIU2 408 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 DENND1CQ8IV53 801 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 SMYD1Q8NB12 490 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CCDC97Q96F63 343 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 AURKBQ96GD4 344 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 RDH12Q96NR8 316 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CDK5RAP1Q96SZ6 601 aaKnown RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ARHGAP39Q9C0H5 1083 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 SARS2Q9NP81 518 aaKnown RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 IL17CQ9P0M4 197 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CBX4O00257 560 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 TAPBPO15533 448 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 DFNA5O60443 496 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 RHOCP08134 193 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 MSH3P20585 1137 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CRHBPP24387 322 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 MTHFRP42898 656 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 SMARCB1Q12824 385 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CRHR2Q13324 411 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CXorf57Q6NSI4 855 aaKnown RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ADAMTSL2Q86TH1 951 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 STK40Q8N2I9 435 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF548Q8NEK5 533 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ACDQ96AP0 544 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CWH43Q9H720 699 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ELOVL2Q9NXB9 296 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 SCN8AQ9UQD0 1980 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ZNF106Q9H2Y7 1883 aaKnown RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 FFAR2O15552 330 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 FZD6O60353 706 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 KCNH1O95259 989 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 PRAMEF12O95522 483 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 OTCP00480 354 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 PCNAP12004 261 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CCND3P30281 292 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CHRNB3Q05901 458 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CACNG1Q06432 222 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 NFATC3Q12968 1075 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 RTP2Q5QGT7 225 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 RNF165Q6ZSG1 346 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 PJA1Q8NG27 643 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 OR52E4Q8NGH9 312 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 SLC22A17Q8WUG5 538 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 ABTB1Q969K4 478 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-202ENST00000372621 IKZF5Q9H5V7 419 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
CTPS1-202ENST00000372621 GLUD1P00367 558 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 TUBA3CQ13748 450 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 RBM48Q5RL73 367 aaKnown RBP12.53□□□□□ -0.4
CTPS1-202ENST00000372621 SULT1C3Q6IMI6 304 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 FRA10AC1Q70Z53 315 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 TAS2R42Q7RTR8 314 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 THAP5Q7Z6K1 395 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 STK32CQ86UX6 486 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 MSRB3Q8IXL7 192 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 CARNMT1Q8N4J0 409 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 SLC13A3Q8WWT9 602 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 SNX19Q92543 992 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 BORCS5Q969J3 196 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 PPP3R2Q96LZ3 170 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 MBOAT4Q96T53 435 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 TOR3AQ9H497 397 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 FANCEQ9HB96 536 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 PCDHB1Q9Y5F3 818 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 PRMT5O14744 637 aaPredicted RBP12.53□□□□□ -0.4
CTPS1-202ENST00000372621 ABCB7O75027 752 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 KATNA1O75449 491 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 NFKBIAP25963 317 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 PPP2R2BQ00005 443 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 PTGR1Q14914 329 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 SMU1Q2TAY7 513 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 BROXQ5VW32 411 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 GALNT13Q8IUC8 556 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 OR2T12Q8NG77 320 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 C2orf15Q8WU43 125 aaKnown RBP12.53□□□□□ -0.4
CTPS1-202ENST00000372621 OSBPL10Q9BXB5 764 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 UGT2B28Q9BY64 529 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 NSUN3Q9H649 340 aaKnown RBP12.53□□□□□ -0.4
CTPS1-202ENST00000372621 FAM118AQ9NWS6 357 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 SLC25A37Q9NYZ2 338 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 USE1Q9NZ43 259 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
CTPS1-202ENST00000372621 DNAJB9Q9UBS3 223 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms