RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 TRIM39Q9HCM9 518 aa9.33□□□□□ -0.92
VTA1-201ENST00000367621 KCTD5Q9NXV2 234 aa9.33□□□□□ -0.92
VTA1-201ENST00000367621 ADAMTS6Q9UKP5 1117 aa9.33□□□□□ -0.92
VTA1-201ENST00000367621 MRPS17Q9Y2R5 130 aaKnown RBP9.33□□□□□ -0.92
VTA1-201ENST00000367621 TMEM98Q9Y2Y6 226 aa9.33□□□□□ -0.92
VTA1-201ENST00000367621 ZNF106Q9H2Y7 1883 aaKnown RBP9.33□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3DA0A087WVF3 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3IA0A087WXS9 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3EA0A087X179 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3KA0A087X1G2 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 SLC5A10A0PJK1 596 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3FA6NER0 549 aaPredicted RBP9.32□□□□□ -0.92
VTA1-201ENST00000367621 OR2AG2A6NM03 316 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3LB9A6J9 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 UBXN8O00124 270 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 BTN3A1O00481 513 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 CHUKO15111 745 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 NUAK1O60285 661 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 SNX3O60493 162 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 MAGEC1O60732 1142 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 SLCO2B1O94956 709 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3HP0C7X1 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 CBSLP0DN79 551 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 DGKAP23743 735 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 GRK2P25098 689 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 CBSP35520 551 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 SOX11P35716 441 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 IGFALSP35858 605 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 KPNA2P52292 529 aaKnown RBP9.32□□□□□ -0.92
VTA1-201ENST00000367621 CDK3Q00526 305 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 NFKB2Q00653 900 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 INPP5AQ14642 412 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 UBXN2BQ14CS0 331 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 LIPMQ5VYY2 423 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 ATG16L1Q676U5 607 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3GQ6DHY5 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3CQ6IPX1 549 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 KLC3Q6P597 504 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TMEM220Q6QAJ8 160 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 SBSNQ6UWP8 590 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TRIM69Q86WT6 500 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 HEATR4Q86WZ0 1026 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 TBC1D3Q8IZP1 549 aaPredicted RBP9.32□□□□□ -0.92
VTA1-201ENST00000367621 LILRA3Q8N6C8 439 aaPredicted RBP9.32□□□□□ -0.92
VTA1-201ENST00000367621 OR2T34Q8NGX1 318 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 STAG3L4Q8TBR4 150 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 LINC00615Q96LM1 132 aaPredicted RBP9.32□□□□□ -0.92
VTA1-201ENST00000367621 TMEM237Q96Q45 408 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 PANX3Q96QZ0 392 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 NELL2Q99435 816 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 ELAC2Q9BQ52 826 aaKnown RBP9.32□□□□□ -0.92
VTA1-201ENST00000367621 TSSK1BQ9BXA7 367 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 PITPNM3Q9BZ71 974 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 CHRDQ9H2X0 955 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 EBF2Q9HAK2 575 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 KCNK13Q9HB14 408 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 SGK2Q9HBY8 427 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 POLMQ9NP87 494 aaPredicted RBP9.32□□□□□ -0.92
VTA1-201ENST00000367621 THAP1Q9NVV9 213 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 MUTYHQ9UIF7 546 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 MID2Q9UJV3 735 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 FBXL21Q9UKT6 434 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 NCKAP1Q9Y2A7 1128 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 PLXNA2O75051 1894 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 MYO10Q9HD67 2058 aa9.32□□□□□ -0.92
VTA1-201ENST00000367621 PRR23AA6NEV1 266 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 LRRC14BA6NHZ5 514 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 F8W8V4 182 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 EIF3FO00303 357 aaPredicted RBP9.31□□□□□ -0.92
VTA1-201ENST00000367621 NDUFAB1O14561 156 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 ZNF195O14628 629 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 LATO43561 262 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 VEGFDO43915 354 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 IPO13O94829 963 aaKnown RBP9.31□□□□□ -0.92
VTA1-201ENST00000367621 CDK14O94921 469 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 ZIC2O95409 532 aaPredicted RBP9.31□□□□□ -0.92
VTA1-201ENST00000367621 TGDSO95455 350 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 IGHV4-34P06331 123 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 CHRNGP07510 517 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 ACADMP11310 421 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 IMPDH1P20839 514 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 MAT2AP31153 395 aaKnown RBP9.31□□□□□ -0.92
VTA1-201ENST00000367621 SLC1A6P48664 564 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 NAGLUP54802 743 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 ABCE1P61221 599 aaKnown RBP9.31□□□□□ -0.92
VTA1-201ENST00000367621 SFSWAPQ12872 951 aaKnown RBP9.31□□□□□ -0.92
VTA1-201ENST00000367621 SF3A3Q12874 501 aaKnown RBP eCLIP9.31□□□□□ -0.92
VTA1-201ENST00000367621 OVGP1Q12889 678 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 SGCGQ13326 291 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 PHKG1Q16816 387 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 UNC50Q53HI1 259 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 PLEKHS1Q5SXH7 462 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 RPS27LQ71UM5 84 aaKnown RBP9.31□□□□□ -0.92
VTA1-201ENST00000367621 CPLX4Q7Z7G2 160 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 FRMD1Q8N878 549 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 PJA1Q8NG27 643 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 ASB11Q8WXH4 323 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 ITPKCQ96DU7 683 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 L3HYPDHQ96EM0 354 aa9.31□□□□□ -0.92
VTA1-201ENST00000367621 SEC16BQ96JE7 1060 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms