RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 DEF8Q6ZN54 512 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF605Q86T29 641 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 ADAMTS15Q8TE58 950 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 ANKRD27Q96NW4 1050 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 LMAN2LQ9H0V9 348 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 EXD2Q9NVH0 621 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 FETUBQ9UGM5 382 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 EIF2B4Q9UI10 523 aaKnown RBP11.43□□□□□ -0.58
SYNE1-204ENST00000367248 hCG_2014768A0A024R1R8 64 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 PRAMEF11O60813 436 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 RING1Q06587 406 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 SERINC3Q13530 473 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 B3GNT9Q6UX72 402 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 METTL27Q8N6F8 245 aaPredicted RBP11.43□□□□□ -0.58
SYNE1-204ENST00000367248 DNASE1L2Q92874 299 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 NMUR2Q9GZQ4 415 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 MCCC2Q9HCC0 563 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 TMEM248Q9NWD8 314 aa11.43□□□□□ -0.58
SYNE1-204ENST00000367248 AP3D1O14617 1153 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PTGESO14684 152 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PI15O43692 258 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 SDC3O75056 442 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 GNAZP19086 355 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 CDC42P60953 191 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 RALGPS1Q5JS13 557 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 TMEM145Q8NBT3 493 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PIWIL1Q96J94 861 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PAAF1Q9BRP4 392 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ZDHHC3Q9NYG2 299 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 LRCH1Q9Y2L9 728 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 TEX28O15482 410 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 LDB2O43679 373 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 CCNFP41002 786 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 NEK2P51955 445 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 RAPSNQ13702 412 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 RFTN2Q52LD8 501 aaPredicted RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 DGKKQ5KSL6 1271 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 COLEC12Q5KU26 742 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 NET1Q7Z628 596 aaPredicted RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 OFCC1Q8IZS5 231 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PDLIM7Q9NR12 457 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PAK4O96013 591 aaPredicted RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 DLDP09622 509 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 CLCNKAP51800 687 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 TNK2Q07912 1038 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF460Q14592 562 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PITRM1Q5JRX3 1037 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 UNC5BQ8IZJ1 945 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ZMIZ2Q8NF64 920 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 VANGL1Q8TAA9 524 aaPredicted RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 XAGE5Q8WWM1 108 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 KLHDC7BQ96G42 594 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF607Q96SK3 696 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 SH3GL2Q99962 352 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 NUSAP1Q9BXS6 441 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 LRMDAQ9H2I8 198 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 GEMIN8Q9NWZ8 242 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 CNOT6Q9ULM6 557 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PRPF19Q9UMS4 504 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PCDHGA11Q9Y5H2 935 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 FOXO6A8MYZ6 492 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 CCNYL3P0C7X3 344 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 AGXTP21549 392 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF142P52746 1687 aaPredicted RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 GTF2H2Q13888 395 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 DCAF12L1Q5VU92 463 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 GTF2H2CQ6P1K8 395 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 C15orf39Q6ZRI6 1047 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 SLC24A3Q9HC58 644 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PCDHB3Q9Y5E6 796 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 UPK3BL1B0FP48 263 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 UPK3BL2E5RIL1 263 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 OR6B1O95007 311 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 BMPR1AP36894 532 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ELF3P78545 371 aaPredicted RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 BANPQ8N9N5 519 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 WDR36Q8NI36 951 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 RAB11FIP5Q9BXF6 653 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 TFB2MQ9H5Q4 396 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ZDHHC18Q9NUE0 388 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 A0A1W2PP55 124 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 COCHO43405 550 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 KDELR3O43731 214 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 TM4SF4P48230 202 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 CLEC6AQ6EIG7 209 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 ARMC8Q8IUR7 673 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 OR4E2Q8NGC2 313 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 SORCS1Q8WY21 1168 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PCBD2Q9H0N5 130 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 NSUN3Q9H649 340 aaKnown RBP11.42□□□□□ -0.58
SYNE1-204ENST00000367248 RNPEPL1Q9HAU8 725 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 COPS7AQ9UBW8 275 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 TMEM59LQ9UK28 342 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 WASF2Q9Y6W5 498 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 PIAS3Q9Y6X2 628 aa11.42□□□□□ -0.58
SYNE1-204ENST00000367248 TMEM265A0A087WTH1 108 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 MEIS3P2A8K0S8 358 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 GJB5O95377 273 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF30P17039 623 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms