RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 COL1A2P08123 1366 aa13.71□□□□□ -0.21
COL6A1-201ENST00000361866 PRR23AA6NEV1 266 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 NFKBIEO00221 500 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 PLOD2O00469 737 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 IFNA14P01570 189 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 UGT2B4P06133 528 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 AKR1A1P14550 325 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 EPORP19235 508 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 CDKN2DP55273 166 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 CDC42P60953 191 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 RPS7P62081 194 aaKnown RBP13.71□□□□□ -0.22
COL6A1-201ENST00000361866 TMEM236Q5W0B7 351 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 FBXL22Q6P050 247 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 TMEM169Q96HH4 297 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 ACBD6Q9BR61 282 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 COPS4Q9BT78 406 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 NAA50Q9GZZ1 169 aaKnown RBP13.71□□□□□ -0.22
COL6A1-201ENST00000361866 TFB2MQ9H5Q4 396 aaKnown RBP13.71□□□□□ -0.22
COL6A1-201ENST00000361866 GIT1Q9Y2X7 761 aa13.71□□□□□ -0.22
COL6A1-201ENST00000361866 PRAMEF1O95521 474 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 ALDH1A1P00352 501 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PRSS56P0CW18 603 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF284Q2VY69 593 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 SULT1C3Q6IMI6 304 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF773Q6PK81 442 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PIWIL3Q7Z3Z3 882 aaKnown RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 CACUL1Q86Y37 369 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 SLC15A4Q8N697 577 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PDPRQ8NCN5 879 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 CNIH3Q8TBE1 160 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 KCNS3Q9BQ31 491 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 CXCL16Q9H2A7 254 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 DYRK4Q9NR20 520 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 KLHL20Q9Y2M5 609 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 WBP11Q9Y2W2 641 aaKnown RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 TBL1XO60907 577 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 UGT2B11O75310 529 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 TSPAN19P0C672 248 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PROZP22891 400 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 ALDH3A2P51648 485 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 MLLT6P55198 1093 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PCBP1Q15365 356 aaKnown RBP eCLIP13.7□□□□□ -0.229e-6■■■■■ 29.7
COL6A1-201ENST00000361866 ANKDD1AQ495B1 522 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 NELL1Q92832 810 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 EVLQ9UI08 416 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 DNMT3LQ9UJW3 386 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 IGKV6D-21A0A0A0MT36 114 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 LOC100130705A0A1B0GUX0 176 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 KPNA6O60684 536 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 HAPLN1P10915 354 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 HCAR3P49019 387 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 FOXA1P55317 472 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 CAMK2GQ13555 558 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 TAZQ16635 292 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 ALFQ53S48 1182 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 NCCRP1Q6ZVX7 275 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 SDK1Q7Z5N4 2213 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 GPR65Q8IYL9 337 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 ELMOD1Q8N336 334 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 GTPBP3Q969Y2 492 aaKnown RBP13.7□□□□□ -0.22
COL6A1-201ENST00000361866 MRGPRX2Q96LB1 330 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PCDHGB5Q9Y5G0 923 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 PMF1-BGLAPU3KQ54 211 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 NUP205Q92621 2012 aa13.7□□□□□ -0.22
COL6A1-201ENST00000361866 TBKBP1A7MCY6 615 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 GABRDO14764 452 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 TACR2P21452 398 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 RPIAP49247 311 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 HECTD3Q5T447 861 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 UBE2R2Q712K3 238 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 RBFAQ8N0V3 343 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 KCTD13Q8WZ19 329 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 NSUN3Q9H649 340 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 TUBA8Q9NY65 449 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ERGIC3Q9Y282 383 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 IGKV6-21A0A0C4DH24 114 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ANKDD1BA6NHY2 528 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PRR23D1E9PI22 279 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PIRO00625 290 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 DFNA5O60443 496 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ABCB7O75027 752 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PRR23D2P0DMB1 279 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ACADVLP49748 655 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 BMXP51813 675 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 C6orf136Q5SQH8 315 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 IFNLR1Q8IU57 520 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 IRGQQ8WZA9 623 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 LRCH3Q96II8 777 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 COPS8Q99627 209 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PAAF1Q9BRP4 392 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 MRPS7Q9Y2R9 242 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms