RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZNF514Q96K75 400 aaPredicted RBP18.33■□□□□ 0.52
CLIP2-202ENST00000361545 PRPF19Q9UMS4 504 aaKnown RBP18.33■□□□□ 0.52
CLIP2-202ENST00000361545 PI15O43692 258 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 MYLK3Q32MK0 819 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 HIPK1Q86Z02 1210 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 APLFQ8IW19 511 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 UBR7Q8N806 425 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 ADCY4Q8NFM4 1077 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 TRAPPC9Q96Q05 1148 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 TEFMQ96QE5 360 aaKnown RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 OLFM1Q99784 485 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 BTBD1Q9H0C5 482 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 ALKBH4Q9NXW9 302 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 PTGFRNQ9P2B2 879 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 ZNF142P52746 1687 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 CNTN5O94779 1100 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 PAQR3Q6TCH7 311 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 C12orf76Q8N812 135 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 RELTQ969Z4 430 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 SAMD4AQ9UPU9 718 aaKnown RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 TCRBV7S3A2A0A539 114 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 PIRO00625 290 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 SAGP10523 405 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 PGDP52209 483 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 OGDHQ02218 1023 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 LRRC32Q14392 662 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 BRAT1Q6PJG6 821 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 FAM46DQ8NEK8 389 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 CDKN2AIPNLQ96HQ2 116 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 SHDQ96IW2 340 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 ZFRQ96KR1 1074 aaKnown RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 PCBD2Q9H0N5 130 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 PCDHGA11Q9Y5H2 935 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 ADSLP30566 484 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 HOXD13P35453 343 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 GPR33Q49SQ1 333 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 GCNT6Q5T4J0 391 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 ANO7Q6IWH7 933 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 CRELD2Q6UXH1 353 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 KXD1Q9BQD3 176 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 CNTN6Q9UQ52 1028 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 A0A1B0GW55 424 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 TIPRLO75663 272 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 DUX4L2P0CJ85 424 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 DUX4L3P0CJ86 424 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 DUX4L4P0CJ87 422 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 DUX4L5P0CJ88 424 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 DUX4L6P0CJ89 424 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 DUX4L7P0CJ90 424 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 LARS2Q15031 903 aaKnown RBP18.32■□□□□ 0.52
CLIP2-202ENST00000361545 UPP1Q16831 310 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 KCT2Q8NC54 265 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 SLC35B2Q8TB61 432 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 GPR62Q9BZJ7 368 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 GRHL1Q9NZI5 618 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 DUX4Q9UBX2 424 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 MCM8Q9UJA3 840 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 ERGIC3Q9Y282 383 aa18.32■□□□□ 0.52
CLIP2-202ENST00000361545 IRF9Q00978 393 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 GHRHRQ02643 423 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 LDLRAD1Q5T700 205 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 ZNF730Q6ZMV8 503 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 IRF7Q92985 503 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 REXO4Q9GZR2 422 aaKnown RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 ALOX12P18054 663 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 PTDSS1P48651 473 aaKnown RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 C7orf26Q96N11 449 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 CRISPLD1Q9H336 500 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 ZDHHC3Q9NYG2 299 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 MFHAS1Q9Y4C4 1052 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 CACNA1FO60840 1977 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 IQCF3P0C7M6 154 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 CPN2P22792 545 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 PRKCHP24723 683 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 NUP62P37198 522 aaPredicted RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 HCAR3P49019 387 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 CYP2U1Q7Z449 544 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 CCDC28BQ9BUN5 200 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 TDRD1Q9BXT4 1180 aaKnown RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 NUAK2Q9H093 628 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 TMEM27Q9HBJ8 222 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 ZNF624Q9P2J8 865 aaPredicted RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 CHRNA1P02708 482 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 RPL10P27635 214 aaKnown RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 CLCNKAP51800 687 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 LSM3P62310 102 aaKnown RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 MTX3Q5HYI7 312 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 SPANXN2Q5MJ10 180 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 ZNF776Q68DI1 518 aaPredicted RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 PAOXQ6QHF9 649 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 RNASE11Q8TAA1 199 aaKnown RBP18.31■□□□□ 0.52
CLIP2-202ENST00000361545 TRPS1Q9UHF7 1281 aa18.31■□□□□ 0.52
CLIP2-202ENST00000361545 IRS2Q9Y4H2 1338 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 SRRM3A6NNA2 597 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 CCNFP41002 786 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 RGS8P57771 180 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 HEPACAMQ14CZ8 416 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 DGUOKQ16854 277 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms