RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 TIAM2Q8IVF5 1701 aa13.77□□□□□ -0.2
SMC5-201ENST00000361138 A0A1W2PQH9 124 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 NR2F1P10589 423 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 OGNP20774 298 aaKnown RBP13.77□□□□□ -0.21
SMC5-201ENST00000361138 GRIA2P42262 883 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 SOWAHAQ2M3V2 549 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 RNASE12Q5GAN4 147 aaKnown RBP13.77□□□□□ -0.21
SMC5-201ENST00000361138 DOK6Q6PKX4 331 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 MRPS31Q92665 395 aaKnown RBP13.77□□□□□ -0.21
SMC5-201ENST00000361138 GTPBP3Q969Y2 492 aaKnown RBP13.77□□□□□ -0.21
SMC5-201ENST00000361138 ZNF641Q96N77 438 aaPredicted RBP13.77□□□□□ -0.21
SMC5-201ENST00000361138 FCRL5Q96RD9 977 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 HBEGFQ99075 208 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 BCO2Q9BYV7 579 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 SLC25A14O95258 325 aaPredicted RBP13.77□□□□□ -0.21
SMC5-201ENST00000361138 SLC15A1P46059 708 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 CD83Q01151 205 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 GPAT3Q53EU6 434 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 SULT1C3Q6IMI6 304 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 CGREF1Q99674 301 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 GOLGA2P5Q9HBQ8 144 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 COMMD9Q9P000 198 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 PHF11Q9UIL8 331 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 DHRS7Q9Y394 339 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 MAGEB17A8MXT2 336 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 PGRMC2O15173 223 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 SNAP29O95721 258 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 MYF6P23409 242 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 ATP5C1P36542 298 aaKnown RBP13.77□□□□□ -0.21
SMC5-201ENST00000361138 FBXO43Q4G163 708 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 CSGALNACT1Q8TDX6 532 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 MUS81Q96NY9 551 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 LPIN3Q9BQK8 851 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 MCUBQ9NWR8 336 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 BAIAP2Q9UQB8 552 aa13.77□□□□□ -0.21
SMC5-201ENST00000361138 CKMP06732 381 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 RPL9P32969 192 aaKnown RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 CACNG1Q06432 222 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 OLIG2Q13516 323 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 HNRNPDQ14103 355 aaKnown RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 E2F2Q14209 437 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 PIK3R6Q5UE93 754 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 HMCESQ96FZ2 354 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 SLC9A7Q96T83 725 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 YIPF2Q9BWQ6 316 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 GDAP2Q9NXN4 497 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 A0A1W2PP18 115 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 NDST3O95803 873 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 CAPZA2P47755 286 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 UFM1P61960 85 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 DENND1CQ8IV53 801 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 ENTPD4Q9Y227 616 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 CEPT1Q9Y6K0 416 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 NRXN3Q9Y4C0 1643 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 SLC28A2O43868 658 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 KPNA6O60684 536 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 EPHB3P54753 998 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 ARSFP54793 590 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 ACOX1Q15067 660 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 PPP1R3AQ16821 1122 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 SMU1Q2TAY7 513 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 MAP1SQ66K74 1059 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 SYCE2Q6PIF2 218 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 PRR23CQ6ZRP0 262 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 TAC4Q86UU9 113 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 VANGL1Q8TAA9 524 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 SNX27Q96L92 541 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 KCNC2Q96PR1 638 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 OXCT2Q9BYC2 517 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 ZCCHC2Q9C0B9 1178 aaKnown RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 PDGFDQ9GZP0 370 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 SGK2Q9HBY8 427 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 MKLN1Q9UL63 735 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 RAB23Q9ULC3 237 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 TRIM64CA6NLI5 447 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 INMTO95050 263 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 CDK4P11802 303 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 CD97P48960 835 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 PMS2P3Q13401 168 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 ARHGAP15Q53QZ3 475 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 LAPTM4BQ86VI4 370 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 TMEM74Q96NL1 305 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 TRIT1Q9H3H1 467 aaKnown RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 ZDHHC6Q9H6R6 413 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 SMIM28A0A1B0GU29 152 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 SIX3O95343 332 aaPredicted RBP13.76□□□□□ -0.21
SMC5-201ENST00000361138 ALDH2P05091 517 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 RHOQP17081 205 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 RCVRNP35243 200 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 PRKAG1P54619 331 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 USP30Q70CQ3 517 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 B3GALT6Q96L58 329 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 MEAF6Q9HAF1 191 aa13.76□□□□□ -0.21
SMC5-201ENST00000361138 USP29Q9HBJ7 922 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms