RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CCSER2Q9H7U1 834 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 NANOGQ9H9S0 305 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 IL21Q9HBE4 155 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 ASAH2Q9NR71 780 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 RIC8BQ9NVN3 520 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 TIMM22Q9Y584 194 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 HEMK1Q9Y5R4 338 aaPredicted RBP12.24□□□□□ -0.45
UBA3-202ENST00000361055 NDUFS3O75489 264 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 SEC24DO94855 1032 aaPredicted RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 ENO2P09104 434 aaPredicted RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 PTPN2P17706 415 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 GABRR2P28476 465 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 OR1E1P30953 314 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 ATP5C1P36542 298 aaKnown RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 ACVRL1P37023 503 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 STT3AP46977 705 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 RAB15P59190 212 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 UFM1P61960 85 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 CTBSQ01459 385 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 MTA1Q13330 715 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 PMS2P3Q13401 168 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 TSNQ15631 228 aaKnown RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 CCNYL2Q5T2Q4 361 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 IFNEQ86WN2 208 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 KIAA2013Q8IYS2 634 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 DPP10Q8N608 796 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 OR56A4Q8NGH8 313 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 FAM210AQ96ND0 272 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 RPRD1AQ96P16 312 aaPredicted RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 CORO1BQ9BR76 489 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 HGH1Q9BTY7 390 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 DNAAF2Q9NVR5 837 aaKnown RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 TBCCD1Q9NVR7 557 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 SUN2Q9UH99 717 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 VPS9D1Q9Y2B5 631 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 UBA6A0AVT1 1052 aaPredicted RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 CDC7O00311 574 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 FGF19O95750 216 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 TBX18O95935 607 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 IGLV3-27P01718 113 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 HLCSP50747 726 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 GALNT3Q14435 633 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 AFTPHQ6ULP2 937 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 Q6ZNX1 250 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 GAREM2Q75VX8 874 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 RIMKLAQ8IXN7 391 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 HS6ST3Q8IZP7 471 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 MIPOL1Q8TD10 442 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 MAGEE2Q8TD90 523 aaPredicted RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 BPIFB1Q8TDL5 484 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 ISG20Q96AZ6 181 aaKnown RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 FBXL20Q96IG2 436 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 CHID1Q9BWS9 393 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 RETREG1Q9H6L5 497 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 RPF2Q9H7B2 306 aaKnown RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 PDFQ9HBH1 243 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 MARCH2Q9P0N8 246 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 TMEM9Q9P0T7 183 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 DNMT3LQ9UJW3 386 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 ZNF225Q9UK10 706 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 PCTPQ9UKL6 214 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 IKZF3Q9UKT9 509 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 CDC14AQ9UNH5 594 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
UBA3-202ENST00000361055 PCDHB3Q9Y5E6 796 aa12.23□□□□□ -0.45
UBA3-202ENST00000361055 NOTCH4Q99466 2003 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 ARNTLO00327 626 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 IFRD1O00458 451 aaPredicted RBP12.22□□□□□ -0.45
UBA3-202ENST00000361055 GIPC1O14908 333 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 GJB3O75712 270 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 PAPLNO95428 1278 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 NCK1P16333 377 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 VARSP26640 1264 aaKnown RBP12.22□□□□□ -0.45
UBA3-202ENST00000361055 HMOX2P30519 316 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 ENTPD1P49961 510 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 KPNA1P52294 538 aaPredicted RBP12.22□□□□□ -0.45
UBA3-202ENST00000361055 ZNF140P52738 457 aaPredicted RBP12.22□□□□□ -0.45
UBA3-202ENST00000361055 EPHA5P54756 1037 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 RING1Q06587 406 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 TAF1AQ15573 450 aaPredicted RBP12.22□□□□□ -0.45
UBA3-202ENST00000361055 FUT11Q495W5 492 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 C6orf136Q5SQH8 315 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 MRPS31Q92665 395 aaKnown RBP12.22□□□□□ -0.45
UBA3-202ENST00000361055 SLC30A3Q99726 388 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 NACA2Q9H009 215 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 IGFLR1Q9H665 355 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 SFXN1Q9H9B4 322 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 POLR1BQ9H9Y6 1135 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 DZANK1Q9NVP4 752 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 DNMT3BQ9UBC3 853 aaKnown RBP12.22□□□□□ -0.45
UBA3-202ENST00000361055 GALPQ9UBC7 116 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 FAM50BQ9Y247 325 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 COCHO43405 550 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 PRSS23O95084 383 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 ATE1O95260 518 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 PIRTP0C851 137 aa12.22□□□□□ -0.45
UBA3-202ENST00000361055 JUNBP17275 347 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms