RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF570Q96NI8 536 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 AURKAO14965 403 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 CRHR1P34998 444 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 RAB5BP61020 215 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 HSPA14Q0VDF9 509 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ZBED5Q49AG3 693 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 RBM12BQ8IXT5 1001 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 VANGL1Q8TAA9 524 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 THAP6Q8TBB0 222 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 B3GAT2Q9NPZ5 323 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 PCDHB1Q9Y5F3 818 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 C12orf71A8MTZ7 269 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 F8VP50 259 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 PLATP00750 562 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 CDC42EP5Q6NZY7 148 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 KIAA1324Q6UXG2 1013 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 FARSAQ9Y285 508 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 MOXD2PA6NHM9 499 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 GJB6O95452 261 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ERP29P30040 261 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 PON2Q15165 354 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 ERVK-5Q9HDB9 667 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 TBCCD1Q9NVR7 557 aa13.06□□□□□ -0.32
SRGAP3-201ENST00000360413 A0A0G2JLW4 131 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 BTBD19C9JJ37 291 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 H0YGN5 161 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC1A2P43004 574 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ALG10BQ5I7T1 473 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 CPNE9Q8IYJ1 553 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ELMO3Q96BJ8 720 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 HIPK3Q9H422 1215 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 PHF24Q9UPV7 400 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ACOX3O15254 700 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 MATN4O95460 622 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 MPSTP25325 297 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 DNAJA1P31689 397 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 TMEM68Q96MH6 324 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 IFT52Q9Y366 437 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 TRIM64BA6NI03 449 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 NDST1P52848 882 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC12A3P55017 1021 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 SEC23AQ15436 765 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 GRK1Q15835 563 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 CUZD1Q86UP6 607 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ADAMTS15Q8TE58 950 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 WDR55Q9H6Y2 383 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 PCDHB11Q9Y5F2 797 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 A0A087X0B3 334 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 CPSF4LA6NMK7 179 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 A8MX80 341 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 AGR2O95994 175 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 TUBG1P23258 451 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ADAM15Q13444 863 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF311Q5JNZ3 666 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 RBM48Q5RL73 367 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 MRPL45Q9BRJ2 306 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 J3QRK9 145 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 FPGTO14772 594 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 DCLK1O15075 740 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 NOBOXO60393 691 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 KERAO60938 352 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 VTNP04004 478 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 USP17L7P0C7H9 530 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 SLC18A2Q05940 514 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 TTLQ8NG68 377 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 FBXL8Q96CD0 374 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 GAS2L1Q99501 681 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 TKTL2Q9H0I9 626 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 PLK2Q9NYY3 685 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 GHRLQ9UBU3 117 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 HIF3AQ9Y2N7 669 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 CDH1P12830 882 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 GNSP15586 552 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 FMO3P31513 532 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 CD86P42081 329 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 PSEN2P49810 448 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 XKRXQ6PP77 449 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 A8MV72 311 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 C22orf31O95567 290 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 PIM1P11309 404 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 DDX6P26196 483 aaKnown RBP eCLIP13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 TPRG1LQ5T0D9 272 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 DGLUCYQ7Z3D6 616 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 GHDCQ8N2G8 530 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 WNT8BQ93098 351 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 OR2B2Q9GZK3 357 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 NDUFAF4Q9P032 175 aa13.05□□□□□ -0.32
SRGAP3-201ENST00000360413 M0R233 179 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 PRDX6P30041 224 aa13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.04□□□□□ -0.32
SRGAP3-201ENST00000360413 FBXO33Q7Z6M2 555 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms