RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 C8orf48Q96LL4 319 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ALG1LQ6GMV1 187 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 OR2AJ1Q8NGZ0 328 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 DENND2DQ9H6A0 471 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 COMMD3Q9UBI1 195 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TSPAN8P19075 237 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FAM151BQ6UXP7 276 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 GLB1L3Q8NCI6 653 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TWIST2Q8WVJ9 160 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FERD3LQ96RJ6 166 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SPON1Q9HCB6 807 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SNTG2Q9NY99 539 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ABI3Q9P2A4 366 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PACSIN3Q9UKS6 424 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ENTPD6O75354 484 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 IL7RP16871 459 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TUBG1P23258 451 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CASP9P55211 416 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CDC42EP5Q6NZY7 148 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF431Q8TF32 576 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 EXOC2Q96KP1 924 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TRIM36Q9NQ86 728 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 MAP4K5Q9Y4K4 846 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 NR2C1P13056 603 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FBXO16Q8IX29 292 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF527Q8NB42 609 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 OSMRQ99650 979 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 C1orf109Q9NX04 203 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 NOP16Q9Y3C1 178 aaKnown RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 NPEPPSL1A6NEC2 478 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GBX2P52951 348 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SNAP47Q5SQN1 464 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 UBE2R2Q712K3 238 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 OR6K6Q8NGW6 343 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 HCN3Q9P1Z3 774 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 PDLIM1O00151 329 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 HSD11B1P28845 292 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 LIMK2P53671 638 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 NECAB3Q96P71 396 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 CALCAP01258 141 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 CERCAMQ5T4B2 595 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 METTL7BQ6UX53 244 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GPR135Q8IZ08 494 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 BPIFB1Q8TDL5 484 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 AQP4P55087 323 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SLC39A12Q504Y0 691 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 H3BRB1 525 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 ITGB1P05556 798 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MAPK3P27361 379 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 DNAJA1P31689 397 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MMP14P50281 582 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 PLEKHH3Q7Z736 793 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GALNT12Q8IXK2 581 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 ZBTB8BQ8NAP8 495 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MFSD8Q8NHS3 518 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 S100A16Q96FQ6 103 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 RNF157Q96PX1 679 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MRPL45Q9BRJ2 306 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 TUT1Q9H6E5 874 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GLS2Q9UI32 602 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 RAB36O95755 333 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 RPA4Q13156 261 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 DNM1P34Q6PK57 102 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GTPBP3Q969Y2 492 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 TIFAQ96CG3 184 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MIOSQ9NXC5 875 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 DISC1C4P0D8 188 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 C9IYK1 514 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SCGB2A1O75556 95 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GJA9P57773 515 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GFOD2Q3B7J2 385 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 C16orf59Q7L2K0 433 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 PGLYRP2Q96PD5 576 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 TSNAXQ99598 290 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 STARD7Q9NQZ5 370 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 CEMIPQ8WUJ3 1361 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 NAE1Q13564 534 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 FDXACB1Q9BRP7 624 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SLCO1B3Q9NPD5 702 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 NUDT4Q9NZJ9 180 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 NFASCO94856 1347 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 CSTBP04080 98 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 IFNA4P05014 189 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 CSTF2P33240 577 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GRIK4Q16099 956 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 POMZP3Q6PJE2 187 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 CYP2U1Q7Z449 544 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 UNC93AQ86WB7 457 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SLC7A6OSQ96CW6 309 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 UNC93B1Q9H1C4 597 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SLC35G6P0C7Q6 338 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MSX2P35548 267 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 UNC5BQ8IZJ1 945 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 TAPBPLQ9BX59 468 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 POLR2J2Q9GZM3 115 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF282Q9UDV7 671 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 BHMG1C9JSJ3 638 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms