RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CIDECQ96AQ7 238 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 SH3KBP1Q96B97 665 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ORAI1Q96D31 301 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 KCTD15Q96SI1 283 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 C7orf50Q9BRJ6 194 aaKnown RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 INPP5KQ9BT40 448 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 MLPHQ9BV36 600 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 NAA50Q9GZZ1 169 aaKnown RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 UCK1Q9HA47 277 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 GPRC5CQ9NQ84 441 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 COL20A1Q9P218 1284 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ENOPH1Q9UHY7 261 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 KCND3Q9UK17 655 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 PPT2Q9UMR5 302 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 OAZ3Q9UMX2 235 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 PCDHGA8Q9Y5G5 932 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 TNPO3Q9Y5L0 923 aaKnown RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CROCCQ5TZA2 2017 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 A8MT66 165 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CTDSPLO15194 276 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 UBDO15205 165 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 STAMBPO95630 424 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 OLFM2O95897 454 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 IL1AP01583 271 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 IGHA2P01877 340 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 MMP10P09238 476 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 UGT2B7P16662 529 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CAPN3P20807 821 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CD72P21854 359 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 PTPN3P26045 913 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 HOXA9P31269 272 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 OR3A3P47888 321 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 PCYT1AP49585 367 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ETV1P50549 477 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 DCDC1P59894 354 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 C1QTNF8P60827 252 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ERVK-8P63133 956 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 COG7P83436 770 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 GBE1Q04446 702 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CAMK1Q14012 370 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 MXD4Q14582 209 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 PPP1R3AQ16821 1122 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 DUOXA2Q1HG44 320 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 TIMM50Q3ZCQ8 353 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CCDC58Q4VC31 144 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ZNF470Q6ECI4 717 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CNSTQ6PJW8 725 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 MPZL3Q6UWV2 235 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CCDC81Q6ZN84 652 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 DPH6Q7L8W6 267 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 BHLHA9Q7RTU4 235 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 RBM23Q86U06 439 aaKnown RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 KIAA2013Q8IYS2 634 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 MIER2Q8N344 545 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 BEND7Q8N7W2 519 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 OR7G3Q8NG95 312 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 POMGNT1Q8WZA1 660 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 FUBP1Q96AE4 644 aaKnown RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 C19orf60Q96EN9 201 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ZNF560Q96MR9 790 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 TMEM209Q96SK2 561 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 AGAP2Q99490 1192 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 TRIM62Q9BVG3 475 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 SHARPINQ9H0F6 387 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 DNTTIP1Q9H147 329 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 CRISPLD1Q9H336 500 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ALG2Q9H553 416 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 RPAP3Q9H6T3 665 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ZNF277Q9NRM2 450 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-201ENST00000359785 RAB6BQ9NRW1 208 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 STMN3Q9NZ72 180 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 ACOT9Q9Y305 439 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 AFG3L2Q9Y4W6 797 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 PCDHGB6Q9Y5F9 930 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 PSAT1Q9Y617 370 aa4.45□□□□□ -1.7
PTPN22-201ENST00000359785 EI24O14681 340 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 KHNYNO15037 678 aaKnown RBP4.44□□□□□ -1.7
PTPN22-201ENST00000359785 XPNPEP2O43895 674 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 WBP4O75554 376 aaKnown RBP4.44□□□□□ -1.7
PTPN22-201ENST00000359785 EDN1P05305 212 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 IFI6P09912 130 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 TGFB3P10600 412 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 SLC2A3P11169 496 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 MZF1P28698 734 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-201ENST00000359785 SERPINB1P30740 379 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 CCR3P51677 355 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 DEFA1P59665 94 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 DEFA3P59666 94 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 LAMC2Q13753 1193 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 TNFAIP1Q13829 316 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 SHROOM1Q2M3G4 852 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-201ENST00000359785 ATP13A4Q4VNC1 1196 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 GPAT3Q53EU6 434 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 UNC50Q53HI1 259 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 RUNDC3AQ59EK9 446 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 ZNF628Q5EBL2 1059 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 GPR139Q6DWJ6 353 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 APOBEC3FQ8IUX4 373 aaKnown RBP4.44□□□□□ -1.7
PTPN22-201ENST00000359785 SLC30A8Q8IWU4 369 aa4.44□□□□□ -1.7
PTPN22-201ENST00000359785 ZNF683Q8IZ20 524 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms