RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 PTCHD3Q3KNS1 767 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 GXYLT1Q4G148 440 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 UBXN11Q5T124 520 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 PDZD9Q8IXQ8 264 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 BTBD1Q9H0C5 482 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 MRM3Q9HC36 420 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 CUEDC1Q9NWM3 386 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 ZNF37AP17032 561 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 AVPR1AP37288 418 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CDH11P55287 796 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 DCDC1P59894 354 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CYP4F2P78329 520 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CYP4F3Q08477 520 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ZNF227Q86WZ6 799 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 AGAP2Q99490 1192 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 RIOX1Q9H6W3 641 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 MGAT4BQ9UQ53 548 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 LRRN3E7EW58 273 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 C8GP07360 202 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 DEDD2Q8WXF8 326 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ZNF471Q9BX82 626 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 LRRN3Q9H3W5 708 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ABCD2Q9UBJ2 740 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 TUBGCP6Q96RT7 1819 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ATG13O75143 517 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 PLEKP08567 350 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 GSTM2P28161 218 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 OR1E1P30953 314 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 DLSTP36957 453 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 THOP1P52888 689 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 PCSK7Q16549 785 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CBWD6Q4V339 395 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 DNM1P34Q6PK57 102 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 HPS6Q86YV9 775 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 OR5K1Q8NHB7 308 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ATG4AQ8WYN0 398 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ARL11Q969Q4 196 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ZBED6CLQ96FA7 236 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 RGPD1P0DJD0 1748 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CSPG5O95196 566 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 DEFA5Q01523 94 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SNTA1Q13424 505 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 LLGL1Q15334 1064 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 TMEM199Q8N511 208 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 PPCDCQ96CD2 204 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CRAMP1Q96RY5 1269 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ACOX2Q99424 681 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 PI4K2AQ9BTU6 479 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SPON2Q9BUD6 331 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CAPN8A6NHC0 703 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 RFPL1O75677 317 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CRYZL1O95825 349 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SLC16A2P36021 539 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 NAA30Q147X3 362 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 DALRD3Q5D0E6 543 aaKnown RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 FAM198BQ6UWH4 519 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 AHSA2Q719I0 299 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SHC3Q92529 594 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SLC35C1Q96A29 364 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 NACC2Q96BF6 587 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CHFRQ96EP1 664 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ELAC1Q9H777 363 aaKnown RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 XPNPEP1Q9NQW7 623 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 GFOD1Q9NXC2 390 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 TSPAN1O60635 241 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 BUD31P41223 144 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 KCNJ1P48048 391 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SEMA5AQ13591 1074 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SETMARQ53H47 684 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 CYP4V2Q6ZWL3 525 aaPredicted RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 MARVELD2Q8N4S9 558 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 MROH8Q9H579 483 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SLCO1B3Q9NPD5 702 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ZNF780BQ9Y6R6 833 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 AKAP3O75969 853 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CBSLP0DN79 551 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 CBSP35520 551 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 MERTKQ12866 999 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 HMBOX1Q6NT76 420 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 METTL2BQ6P1Q9 378 aaKnown RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 TRPC4Q9UBN4 977 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 TSR3Q9UJK0 312 aaKnown RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 DEFA6Q01524 100 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SLC35F1Q5T1Q4 408 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 RNASEH2BQ5TBB1 312 aaKnown RBP7.93□□□□□ -1.14
HTT-201ENST00000355072 ZIM2Q9NZV7 527 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 TDP2O95551 362 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 MT-CO2P00403 227 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 A1BGP04217 495 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 NDUFAF5Q5TEU4 345 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 FAM20CQ8IXL6 584 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 KLHL6Q8WZ60 621 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 MMP19Q99542 508 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 DCSTAMPQ9H295 470 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 C9P02748 559 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 LTFP02788 710 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 KCNC3Q14003 757 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 SELPLGQ14242 412 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 ABRAXAS2Q15018 415 aa7.93□□□□□ -1.14
HTT-201ENST00000355072 WSCD2Q2TBF2 565 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms