RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RLN3Q8WXF3 142 aa15.31■□□□□ 0.04
CTSA-202ENST00000354880 GLMNQ92990 594 aa15.31■□□□□ 0.04
CTSA-202ENST00000354880 TMEM237Q96Q45 408 aa15.31■□□□□ 0.04
CTSA-202ENST00000354880 ELAC2Q9BQ52 826 aaKnown RBP15.31■□□□□ 0.04
CTSA-202ENST00000354880 GULP1Q9UBP9 304 aa15.31■□□□□ 0.04
CTSA-202ENST00000354880 IGHV1OR15-9A0A0B4J2B8 117 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 POM121BA6NF01 834 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 NCF1BA6NI72 391 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 NCF1CA8MVU1 366 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 CACNB4O00305 520 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 LIN7AO14910 233 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 LYPLA1O75608 230 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 POP7O75817 140 aaKnown RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 NCF1P14598 390 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 IMPDH1P20839 514 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 PXNP49023 591 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 CCR5P51681 352 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 HK3P52790 923 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 ZNF658BQ4V348 819 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 CFAP157Q5JU67 520 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 KIAA0895LQ68EN5 471 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 RAB44Q7Z6P3 723 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 PIGWQ7Z7B1 504 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 C11orf96Q7Z7L8 435 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 LRRTM4Q86VH4 590 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 CRLF3Q8IUI8 442 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 FBXO39Q8N4B4 442 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 LILRA3Q8N6C8 439 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 OR2L2Q8NH16 312 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 PPP4R1Q8TF05 950 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 MOCOSQ96EN8 888 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 GPR174Q9BXC1 333 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 DRC3Q9H069 523 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 UTP6Q9NYH9 597 aaKnown RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 CD274Q9NZQ7 290 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 ADAMTS6Q9UKP5 1117 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 TMCO1Q9UM00 188 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 OARD1Q9Y530 152 aa15.3■□□□□ 0.04
CTSA-202ENST00000354880 PCYT1BQ9Y5K3 369 aaPredicted RBP15.3■□□□□ 0.04
CTSA-202ENST00000354880 MGAT4DA6NG13 374 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 GRID2O43424 1007 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 KLK8O60259 260 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 SNX3O60493 162 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 SNX2O60749 519 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 FSBPO95073 299 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 IGHV4-34P06331 123 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 C8GP07360 202 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 HOXC4P09017 264 aaPredicted RBP15.29■□□□□ 0.04
CTSA-202ENST00000354880 AKT2P31751 481 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ARRB2P32121 409 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 CLDN2P57739 230 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ARHGAP8P85298 464 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 SF3A3Q12874 501 aaKnown RBP eCLIP15.29■□□□□ 0.044e-7■■□□□ 13.4
CTSA-202ENST00000354880 OVGP1Q12889 678 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 RCN2Q14257 317 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ZNF678Q5SXM1 525 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 CFAP206Q8IYR0 622 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 FRMD1Q8N878 549 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 HM13Q8TCT9 377 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 DLG3Q92796 817 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 L3HYPDHQ96EM0 354 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 IER2Q9BTL4 223 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 EBF2Q9HAK2 575 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ACSS2Q9NR19 701 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 NUDT4Q9NZJ9 180 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 PRKAB1Q9Y478 270 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 DNMT3AQ9Y6K1 912 aaPredicted RBP15.29■□□□□ 0.04
CTSA-202ENST00000354880 KMOO15229 486 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 NPHS1O60500 1241 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 TGDSO95455 350 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 HSPA4LO95757 839 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 CEACAM5P06731 702 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 TROVE2P10155 538 aaKnown RBP eCLIP15.29■□□□□ 0.04
CTSA-202ENST00000354880 SERPINB5P36952 375 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 CXCL12P48061 93 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 PREPP48147 710 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ALDH18A1P54886 795 aaKnown RBP15.29■□□□□ 0.04
CTSA-202ENST00000354880 HERVK_113P63132 956 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 PLOD1Q02809 727 aaPredicted RBP15.29■□□□□ 0.04
CTSA-202ENST00000354880 SIGLEC14Q08ET2 396 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 PHKG1Q16816 387 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 PLA2G4EQ3MJ16 856 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ATG14Q6ZNE5 492 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 UBE2R2Q712K3 238 aaPredicted RBP15.29■□□□□ 0.04
CTSA-202ENST00000354880 SPATA21Q7Z572 469 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 AMZ2Q86W34 360 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 SLC22A15Q8IZD6 547 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 FAM160A2Q8N612 972 aaPredicted RBP15.29■□□□□ 0.04
CTSA-202ENST00000354880 ASB11Q8WXH4 323 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 BIRC7Q96CA5 298 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 CNDP1Q96KN2 507 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 BMFQ96LC9 184 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 NECAB3Q96P71 396 aaPredicted RBP15.29■□□□□ 0.04
CTSA-202ENST00000354880 SORT1Q99523 831 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ERVK-6Q9BXR3 956 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 RMI1Q9H9A7 625 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 COG4Q9H9E3 785 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 RDH14Q9HBH5 336 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 ZNHIT2Q9UHR6 403 aa15.29■□□□□ 0.04
CTSA-202ENST00000354880 SLC17A4Q9Y2C5 497 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms