RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 LDOC1O95751 146 aaPredicted RBP21.71■■□□□ 1.07
SHMT1-203ENST00000354098 GSTM1P09488 218 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 AOAHP28039 575 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 MAZP56270 477 aaKnown RBP21.71■■□□□ 1.07
SHMT1-203ENST00000354098 TIAL1Q01085 375 aaKnown RBP eCLIP21.71■■□□□ 1.07
SHMT1-203ENST00000354098 GSTM4Q03013 218 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 ABRAXAS1Q6UWZ7 409 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 ARL10Q8N8L6 244 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 MRRFQ96E11 262 aaKnown RBP21.71■■□□□ 1.07
SHMT1-203ENST00000354098 SLC30A3Q99726 388 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 WWP1Q9H0M0 922 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 ACSS3Q9H6R3 686 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 NSMCE4AQ9NXX6 385 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 FTSJ1Q9UET6 329 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 RAB21Q9UL25 225 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 ACSL5Q9ULC5 683 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 CDYLQ9Y232 598 aa21.71■■□□□ 1.07
SHMT1-203ENST00000354098 ARHGEF17Q96PE2 2063 aaPredicted RBP21.7■■□□□ 1.06
SHMT1-203ENST00000354098 OR52A4PA6NMU1 304 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 E5RI56 91 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 PGGT1BP53609 377 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 HSPA14Q0VDF9 509 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 DNAJC3Q13217 504 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 AGAP9Q5VTM2 703 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 WASH2PQ6VEQ5 465 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 C17orf82Q86X59 251 aaPredicted RBP21.7■■□□□ 1.06
SHMT1-203ENST00000354098 VRK3Q8IV63 474 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 GPATCH11Q8N954 259 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 AENQ8WTP8 325 aaKnown RBP21.7■■□□□ 1.06
SHMT1-203ENST00000354098 CYTH2Q99418 400 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 WASH6PQ9NQA3 447 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 CEP250Q9BV73 2442 aa21.7■■□□□ 1.06
SHMT1-203ENST00000354098 LIN7AO14910 233 aaPredicted RBP21.69■■□□□ 1.06
SHMT1-203ENST00000354098 CLCN7P51798 805 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 CDKN2DP55273 166 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 SLC29A2Q14542 456 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 SYTL3Q4VX76 610 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 C14orf28Q4W4Y0 310 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 OTOAQ7RTW8 1153 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 SFRP1Q8N474 314 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 ARL14Q8N4G2 192 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 SIDT2Q8NBJ9 832 aaKnown RBP21.69■■□□□ 1.06
SHMT1-203ENST00000354098 SLC37A2Q8TED4 501 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 KCNJ9Q92806 393 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 CPNE1Q99829 537 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 OR52A5Q9H2C5 316 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 ZNF624Q9P2J8 865 aaPredicted RBP21.69■■□□□ 1.06
SHMT1-203ENST00000354098 CFAP20Q9Y6A4 193 aaKnown RBP21.69■■□□□ 1.06
SHMT1-203ENST00000354098 COMMD10Q9Y6G5 202 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 A0A087WUV0 522 aaPredicted RBP21.69■■□□□ 1.06
SHMT1-203ENST00000354098 PRAMEF33A0A0G2JMD5 474 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 GPC4O75487 556 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 MCM3P25205 808 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 GIMAP7Q8NHV1 300 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 ASZ1Q8WWH4 475 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 TMEM159Q96B96 161 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 INSM2Q96T92 566 aaPredicted RBP21.69■■□□□ 1.06
SHMT1-203ENST00000354098 GPR21Q99679 349 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 RHOJQ9H4E5 214 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 TXNDC16Q9P2K2 825 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 PADI4Q9UM07 663 aa21.69■■□□□ 1.06
SHMT1-203ENST00000354098 CKMT1AP12532 417 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 GP5P40197 560 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 DAB2P98082 770 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 NR0B2Q15466 257 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 HECTD2Q5U5R9 776 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 CAPRIN2Q6IMN6 1127 aaKnown RBP21.68■■□□□ 1.06
SHMT1-203ENST00000354098 PIM3Q86V86 326 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 GLMNQ92990 594 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 VPS39Q96JC1 886 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 RMDN2Q96LZ7 410 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 RBBP8Q99708 897 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 CDC6Q99741 560 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 OLFM1Q99784 485 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 LATS2Q9NRM7 1088 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 MTO1Q9Y2Z2 717 aaKnown RBP21.68■■□□□ 1.06
SHMT1-203ENST00000354098 VWA7Q9Y334 891 aa21.68■■□□□ 1.06
SHMT1-203ENST00000354098 COL5A1P20908 1838 aaPredicted RBP21.68■■□□□ 1.06
SHMT1-203ENST00000354098 CPED1A4D0V7 1026 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 GIPC1O14908 333 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 APOA4P06727 396 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 ABHD2P08910 425 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 SLC35G4P0C7Q5 338 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 CKMT2P17540 419 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 CSRP1P21291 193 aaKnown RBP21.67■■□□□ 1.06
SHMT1-203ENST00000354098 HOXD11P31277 338 aaPredicted RBP21.67■■□□□ 1.06
SHMT1-203ENST00000354098 SLC19A1P41440 591 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 RPA4Q13156 261 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 NAB1Q13506 487 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 TRIP6Q15654 476 aaKnown RBP21.67■■□□□ 1.06
SHMT1-203ENST00000354098 UAP1Q16222 522 aaPredicted RBP21.67■■□□□ 1.06
SHMT1-203ENST00000354098 RPE65Q16518 533 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 GUSBP11Q6P575 273 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 ZBTB2Q8N680 514 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 MAPK15Q8TD08 544 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 UBLCP1Q8WVY7 318 aaPredicted RBP21.67■■□□□ 1.06
SHMT1-203ENST00000354098 ELMO2Q96JJ3 720 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 SLC32A1Q9H598 525 aa21.67■■□□□ 1.06
SHMT1-203ENST00000354098 KIR2DS5A0A0G2JLQ3 304 aa21.66■■□□□ 1.06
SHMT1-203ENST00000354098 A0A0G2JNG1 304 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms