RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SARS2Q9NP81 518 aaKnown RBP24.14■■□□□ 1.46
CPNE1-202ENST00000352393 DNAJB9Q9UBS3 223 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 SLC27A5Q9Y2P5 690 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 CCL27Q9Y4X3 112 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 TNPO3Q9Y5L0 923 aaKnown RBP24.14■■□□□ 1.46
CPNE1-202ENST00000352393 RAI2Q9Y5P3 530 aa24.14■■□□□ 1.46
CPNE1-202ENST00000352393 H7C0S8 307 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 ACSL4O60488 711 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 KCNH1O95259 989 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 F11P03951 625 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 CNPP09543 421 aaKnown RBP24.14■■□□□ 1.45
CPNE1-202ENST00000352393 ARL1P40616 181 aaPredicted RBP24.14■■□□□ 1.45
CPNE1-202ENST00000352393 PTGER3P43115 390 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 CDH4P55283 916 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 GTF2H2Q13888 395 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 ABRAXAS2Q15018 415 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 TRIM71Q2Q1W2 868 aaKnown RBP24.14■■□□□ 1.45
CPNE1-202ENST00000352393 RFTN2Q52LD8 501 aaPredicted RBP24.14■■□□□ 1.45
CPNE1-202ENST00000352393 FAM26DQ5JW98 314 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 TTC23Q5W5X9 447 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 GTF2H2CQ6P1K8 395 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 SBSNQ6UWP8 590 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 ENPP6Q6UWR7 440 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 DCDC5Q6ZRR9 648 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 DDHD1Q8NEL9 900 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 OR2T12Q8NG77 320 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 B3GALT6Q96L58 329 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 FEM1AQ9BSK4 669 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 BPIFA1Q9NP55 256 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 FAM118AQ9NWS6 357 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 USE1Q9NZ43 259 aa24.14■■□□□ 1.45
CPNE1-202ENST00000352393 G3V2T6 193 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 CD97P48960 835 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 PPP2R2BQ00005 443 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 MRPL58Q14197 206 aaKnown RBP24.13■■□□□ 1.45
CPNE1-202ENST00000352393 PLA2G4EQ3MJ16 856 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 FKBP9P1Q75LS8 142 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 RTN4RL1Q86UN2 441 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SPARTQ8N0X7 666 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 CHCHD4Q8N4Q1 142 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 EFHBQ8N7U6 833 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 CHDHQ8NE62 594 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SLC13A3Q8WWT9 602 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SGCDQ92629 289 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SDCCAG3Q96C92 435 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SPATA17Q96L03 361 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 OSBPL10Q9BXB5 764 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.13■■□□□ 1.456e-9■□□□□ 10.4
CPNE1-202ENST00000352393 RETREG1Q9H6L5 497 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 PSME2Q9UL46 239 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 PCDHGC4Q9Y5F7 938 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 PCDHGA8Q9Y5G5 932 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 IQCF5A8MTL0 148 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 STX7O15400 261 aaKnown RBP24.13■■□□□ 1.45
CPNE1-202ENST00000352393 BCL10O95999 233 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 HTR1AP08908 422 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 GABARAPL2P60520 117 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 EPS8Q12929 822 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 FRA10AC1Q70Z53 315 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 NECAB2Q7Z6G3 386 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 ADAMTSL2Q86TH1 951 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 BPIFB6Q8NFQ5 453 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 FIG4Q92562 907 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 CSF3RQ99062 836 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SEPT5Q99719 369 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-202ENST00000352393 AMBRA1Q9C0C7 1298 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 ADNPQ9H2P0 1102 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SMURF2Q9HAU4 748 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SPC25Q9HBM1 224 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 GNPTGQ9UJJ9 305 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 FNDC3AQ9Y2H6 1198 aaKnown RBP24.13■■□□□ 1.45
CPNE1-202ENST00000352393 SH3GLB1Q9Y371 365 aa24.13■■□□□ 1.45
CPNE1-202ENST00000352393 MTMR11A4FU01 709 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 OR6C75A6NL08 312 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 ANKRD66B4E2M5 251 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 GMNNO75496 209 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 VNN2O95498 520 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 IST1P53990 364 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 RPS24P62847 133 aaKnown RBP24.12■■□□□ 1.45
CPNE1-202ENST00000352393 NKX3-2P78367 333 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 PDZD8Q8NEN9 1154 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 FBXO30Q8TB52 745 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 PPP3R2Q96LZ3 170 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 DHRS7Q9Y394 339 aa24.12■■□□□ 1.45
CPNE1-202ENST00000352393 BOLA2-SMG1P6H3BVE0 249 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 EOMESO95936 686 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 OTCP00480 354 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 PLA2G16P53816 162 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 ARPP19P56211 112 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 PLIN5Q00G26 463 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 CYP4F3Q08477 520 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 PTPRRQ15256 657 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 GALNT13Q8IUC8 556 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 SVOPLQ8N434 492 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 TRUB1Q8WWH5 349 aaKnown RBP24.11■■□□□ 1.45
CPNE1-202ENST00000352393 GTF2H4Q92759 462 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 IKZF5Q9H5V7 419 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 GPR39O43194 453 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 ADAMTS4O75173 837 aa24.11■■□□□ 1.45
CPNE1-202ENST00000352393 ASGR1P07306 291 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms