RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 LRCH1Q9Y2L9 728 aa12□□□□□ -0.49
SMAD9-201ENST00000350148 A0A0D9SEW6 157 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SNTNA6NMZ2 147 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SLC16A5O15375 505 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 PI15O43692 258 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 RFPL1O75677 317 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ITPRIPL2Q3MIP1 535 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ZCCHC8Q6NZY4 707 aaKnown RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 TMEM220Q6QAJ8 160 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 EID3Q8N140 333 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 RHEBL1Q8TAI7 183 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SMARCD2Q92925 531 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ISG20Q96AZ6 181 aaKnown RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 MYRFLQ96LU7 910 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ADGRE2Q9UHX3 823 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 MAGEL2Q9UJ55 1249 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 AP4S1Q9Y587 144 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 EIF3FO00303 357 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 GSC2O15499 205 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SEC24DO94855 1032 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 NDUFS1P28331 727 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 EOGTQ5NDL2 527 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 C10orf62Q5T681 223 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 RANBP10Q6VN20 620 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 GALNT7Q86SF2 657 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ULK2Q8IYT8 1036 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ZDHHC14Q8IZN3 488 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF784Q8NCA9 323 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ITFG1Q8TB96 612 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CLSTN3Q9BQT9 956 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CCM2Q9BSQ5 444 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CCDC177Q9NQR7 707 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF490Q9ULM2 529 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 HHLA1C9JL84 531 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ANXA6P08133 673 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 PLEKHS1Q5SXH7 462 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CWF19L1Q69YN2 538 aaKnown RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ERICH5Q6P6B1 374 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 PRR23BQ6ZRT6 265 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 NRSN1Q8IZ57 195 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CPSF7Q8N684 471 aaKnown RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 FITM2Q8N6M3 262 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF781Q8N8C0 355 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 RCN3Q96D15 328 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CYP2S1Q96SQ9 504 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 MIPEPQ99797 713 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SPATA5L1Q9BVQ7 753 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 WNT6Q9Y6F9 365 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ARPC4-TTLL3A0A0A6YYG9 625 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 A0A0J9YYE9 177 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 ATP1B2P14415 290 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 HOXC8P31273 242 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 AKT2P31751 481 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 KRT20P35900 424 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 NUP107P57740 925 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SLC25A3Q00325 362 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 TNK2Q07912 1038 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SLC9A5Q14940 896 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CHRNA6Q15825 494 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 CCDC142Q17RM4 750 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 DPY19L1Q2PZI1 675 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 NATD1Q8N6N6 113 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 AVL9Q8NBF6 648 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SLC43A3Q8NBI5 491 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 NKX1-2Q9UD57 310 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-201ENST00000350148 SLC2A6Q9UGQ3 507 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 PCDHGA11Q9Y5H2 935 aa11.99□□□□□ -0.49
SMAD9-201ENST00000350148 C2orf78A6NCI8 922 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 A8MT66 165 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 UBXN8O00124 270 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 C4BPBP20851 252 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 GSTT1P30711 240 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 GDI1P31150 447 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF805Q5CZA5 627 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 MED27Q6P2C8 311 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 PAQR3Q6TCH7 311 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 VITQ6UXI7 678 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 IZUMO2Q6UXV1 221 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 YIPF2Q9BWQ6 316 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 ARNT2Q9HBZ2 717 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 MARCH5Q9NX47 278 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 TRIM64CA6NLI5 447 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 CCL22O00626 93 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 LIN7AO14910 233 aaPredicted RBP11.98□□□□□ -0.49
SMAD9-201ENST00000350148 TRBC1P01850 177 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 GJA1P17302 382 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 HNF4AP41235 474 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 CPSF6Q16630 551 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMAD9-201ENST00000350148 TCHHL1Q5QJ38 904 aaPredicted RBP11.98□□□□□ -0.49
SMAD9-201ENST00000350148 CRTC3Q6UUV7 619 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 ADHFE1Q8IWW8 467 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 GPR150Q8NGU9 434 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 CERS4Q9HA82 394 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 SGK2Q9HBY8 427 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 FPGTO14772 594 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 FFAR3O14843 346 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 GPR42O15529 346 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 FFAR2O15552 330 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms