RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TRIM56Q9BRZ2 755 aaKnown RBP21.61■■□□□ 1.05
SNX3-202ENST00000349379 TMEM9Q9P0T7 183 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 FAM8A1Q9UBU6 413 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 ANAPC5Q9UJX4 755 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 DMXL2Q8TDJ6 3036 aa21.61■■□□□ 1.05
SNX3-202ENST00000349379 TTI1O43156 1089 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 VAPBO95292 243 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 FTH1P02794 183 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 SLC35G4P0C7Q5 338 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 OR56A5P0C7T3 313 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 C16orf72Q14CZ0 275 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 ANKRD20A4Q4UJ75 823 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 IZUMO3Q5VZ72 239 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 SNIP1Q8TAD8 396 aaKnown RBP21.6■■□□□ 1.05
SNX3-202ENST00000349379 ZFPM2Q8WW38 1151 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 CCDC74BQ96LY2 380 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 SLC46A1Q96NT5 459 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.6■■□□□ 1.05
SNX3-202ENST00000349379 SAMD15Q9P1V8 674 aa21.6■■□□□ 1.05
SNX3-202ENST00000349379 MN1Q10571 1320 aaPredicted RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 KMT2BQ9UMN6 2715 aaPredicted RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 ZCWPW2A0A1B0GU75 182 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 CDRT15L2A8MXV6 281 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 LIN7AO14910 233 aaPredicted RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 PLD2O14939 933 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 HGSO14964 777 aaPredicted RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 TLX3O43711 291 aaPredicted RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 POLBP06746 335 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 RPS3P23396 243 aaKnown RBP eCLIP21.59■■□□□ 1.05
SNX3-202ENST00000349379 CD151P48509 253 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 TYSND1Q2T9J0 566 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 PHF19Q5T6S3 580 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 DUS1LQ6P1R4 473 aaKnown RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 CASC4Q6P4E1 433 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 SPATA4Q8NEY3 305 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 ZNF669Q96BR6 464 aaPredicted RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 C12orf66Q96MD2 445 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 ZNF578Q96N58 590 aaPredicted RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 TRIM51Q9BSJ1 452 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 P2RY12Q9H244 342 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 IMP3Q9NV31 184 aaKnown RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 LOXL2Q9Y4K0 774 aa21.59■■□□□ 1.05
SNX3-202ENST00000349379 CFAP20Q9Y6A4 193 aaKnown RBP21.59■■□□□ 1.05
SNX3-202ENST00000349379 SLC5A10A0PJK1 596 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 SRRM3A6NNA2 597 aaPredicted RBP21.58■■□□□ 1.05
SNX3-202ENST00000349379 F8W8V4 182 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 PRMT5O14744 637 aaPredicted RBP21.58■■□□□ 1.05
SNX3-202ENST00000349379 TP73O15350 636 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 USP1O94782 785 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 UBXN7O94888 489 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 C9P02748 559 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 PAMP19021 973 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 OGNP20774 298 aaKnown RBP21.58■■□□□ 1.05
SNX3-202ENST00000349379 PDHA2P29803 388 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 ERVPABLB-1P60509 514 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 MORF4L2Q15014 288 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 ZNF572Q7Z3I7 529 aaPredicted RBP21.58■■□□□ 1.05
SNX3-202ENST00000349379 FBXO39Q8N4B4 442 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 KRT12Q99456 494 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 CMKLR1Q99788 373 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 CARD6Q9BX69 1037 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 RPS6KL1Q9Y6S9 549 aa21.58■■□□□ 1.05
SNX3-202ENST00000349379 ANKRD11Q6UB99 2663 aaPredicted RBP21.57■■□□□ 1.04
SNX3-202ENST00000349379 SMAPO00193 183 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 SEC31AO94979 1220 aaKnown RBP21.57■■□□□ 1.04
SNX3-202ENST00000349379 ITGA2BP08514 1039 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 MAPK9P45984 424 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 CAPZBP47756 277 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 PREPP48147 710 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 MRNIPQ6NTE8 343 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 HIBCHQ6NVY1 386 aaPredicted RBP21.57■■□□□ 1.04
SNX3-202ENST00000349379 ARHGAP22Q7Z5H3 698 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 CLEC14AQ86T13 490 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 RCBTB1Q8NDN9 531 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 LKAAEAR1Q8TD35 194 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 NCSTNQ92542 709 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 ELMO1Q92556 727 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 RSC1A1Q92681 617 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 FGF11Q92914 225 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 TCF12Q99081 682 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 RAB33BQ9H082 229 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 KIR3DX1Q9H7L2 352 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 HEBP2Q9Y5Z4 205 aa21.57■■□□□ 1.04
SNX3-202ENST00000349379 GOLGA8KD6RF30 607 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 GOLGA8TH3BQL2 631 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 HGFP14210 728 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 TYRP1P17643 537 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 MPSTP25325 297 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 MSS51Q4VC12 460 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 PDZD3Q86UT5 571 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 LRRC6Q86X45 466 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 PLXDC1Q8IUK5 500 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 LPGAT1Q92604 370 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 STAMBPL1Q96FJ0 436 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 C16orf45Q96MC5 204 aaPredicted RBP21.56■■□□□ 1.04
SNX3-202ENST00000349379 THSD1Q9NS62 852 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 EPHA6Q9UF33 1036 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 SLC24A2Q9UI40 661 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 RAXQ9Y2V3 346 aa21.56■■□□□ 1.04
SNX3-202ENST00000349379 CELSR3Q9NYQ7 3312 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms