RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 RPA4Q13156 261 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 CTBP1Q13363 440 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 SHBQ15464 509 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 KYNUQ16719 465 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 ZNF648Q5T619 568 aaPredicted RBP18.38■□□□□ 0.53
CDHR4-201ENST00000343366 PTRHD1Q6GMV3 140 aaKnown RBP18.38■□□□□ 0.53
CDHR4-201ENST00000343366 TRMT10BQ6PF06 316 aaKnown RBP18.38■□□□□ 0.53
CDHR4-201ENST00000343366 ZNF547Q8IVP9 402 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 HM13Q8TCT9 377 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 LPGAT1Q92604 370 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 CPNE1Q99829 537 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 BOCQ9BWV1 1114 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 P2RY12Q9H244 342 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 RRAGDQ9NQL2 400 aaPredicted RBP18.38■□□□□ 0.53
CDHR4-201ENST00000343366 NINJ2Q9NZG7 142 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 RAB21Q9UL25 225 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 ACSL5Q9ULC5 683 aa18.38■□□□□ 0.53
CDHR4-201ENST00000343366 PNMA8BQ9ULN7 279 aaPredicted RBP18.38■□□□□ 0.53
CDHR4-201ENST00000343366 A0A087WUV0 522 aaPredicted RBP18.37■□□□□ 0.53
CDHR4-201ENST00000343366 FAM159BA6NKW6 160 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 LIN7AO14910 233 aaPredicted RBP18.37■□□□□ 0.53
CDHR4-201ENST00000343366 TLX3O43711 291 aaPredicted RBP18.37■□□□□ 0.53
CDHR4-201ENST00000343366 CD9P21926 228 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 IDSP22304 550 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 EIF2S3P41091 472 aaKnown RBP18.37■□□□□ 0.53
CDHR4-201ENST00000343366 CD151P48509 253 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 CTSCP53634 463 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 CSE1LP55060 971 aaKnown RBP18.37■□□□□ 0.53
CDHR4-201ENST00000343366 EIF3BP55884 814 aaKnown RBP18.37■□□□□ 0.53
CDHR4-201ENST00000343366 VSNL1P62760 191 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 BNIP3Q12983 259 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 KLHL38Q2WGJ6 581 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 PRAMEF14Q5SWL7 426 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 UGT3A1Q6NUS8 523 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 CRTC3Q6UUV7 619 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 PCSK4Q6UW60 755 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 WASH2PQ6VEQ5 465 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 DET1Q7L5Y6 550 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 C11orf96Q7Z7L8 435 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 TMPRSS12Q86WS5 348 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 DENND6AQ8IWF6 608 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 OR4C6Q8NH72 309 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 PARD6BQ9BYG5 372 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 WASH6PQ9NQA3 447 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 IL1RAPL1Q9NZN1 696 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 KLHL42Q9P2K6 505 aa18.37■□□□□ 0.53
CDHR4-201ENST00000343366 E5RI56 91 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 OR1I1O60431 355 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 ACP5P13686 325 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 PKMP14618 531 aaKnown RBP18.36■□□□□ 0.53
CDHR4-201ENST00000343366 ACTR1BP42025 376 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 SKIV2L2P42285 1042 aaKnown RBP18.36■□□□□ 0.53
CDHR4-201ENST00000343366 ACTR1AP61163 376 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 TMED2Q15363 201 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 ZCCHC8Q6NZY4 707 aaKnown RBP18.36■□□□□ 0.53
CDHR4-201ENST00000343366 DHRS13Q6UX07 377 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 CAPN12Q6ZSI9 719 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 KANSL1Q7Z3B3 1105 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 LDB1Q86U70 411 aaPredicted RBP18.36■□□□□ 0.53
CDHR4-201ENST00000343366 UNC5BQ8IZJ1 945 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 ZNF843Q8N446 348 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 CLDN19Q8N6F1 224 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 FAM181AQ8N9Y4 354 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 OR6C4Q8NGE1 309 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 FBF1Q8TES7 1133 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 ASZ1Q8WWH4 475 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 KCNJ9Q92806 393 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 BIRC8Q96P09 236 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 CCDC77Q9BR77 488 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 TXLNGYQ9BZA5 131 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 TCEAL2Q9H3H9 227 aaPredicted RBP18.36■□□□□ 0.53
CDHR4-201ENST00000343366 ACSS3Q9H6R3 686 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 LATS2Q9NRM7 1088 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 KLC4Q9NSK0 619 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 SPATS2LQ9NUQ6 558 aaKnown RBP18.36■□□□□ 0.53
CDHR4-201ENST00000343366 CRYL1Q9Y2S2 319 aa18.36■□□□□ 0.53
CDHR4-201ENST00000343366 YY2O15391 372 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 SGTAO43765 313 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 SDC3O75056 442 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 ERLIN1O75477 346 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 AHSGP02765 367 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 APOA4P06727 396 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 RPIAP49247 311 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 C6orf132Q5T0Z8 1188 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 GRTP1Q5TC63 336 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 AGAP9Q5VTM2 703 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 METRNLQ641Q3 311 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 STRA8Q7Z7C7 330 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 SLC25A45Q8N413 288 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 DPEP2Q9H4A9 486 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 PPCSQ9HAB8 311 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 FBXO6Q9NRD1 293 aaPredicted RBP18.35■□□□□ 0.53
CDHR4-201ENST00000343366 TAAR2Q9P1P5 351 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDHR4-201ENST00000343366 PCDHGA1Q9Y5H4 931 aa18.35■□□□□ 0.53
CDHR4-201ENST00000343366 V9GYY5 206 aaPredicted RBP18.35■□□□□ 0.53
CDHR4-201ENST00000343366 KIR2DS5A0A0G2JLQ3 304 aa18.34■□□□□ 0.53
CDHR4-201ENST00000343366 A0A0G2JNG1 304 aa18.34■□□□□ 0.53
CDHR4-201ENST00000343366 KIR2DS3K7RE56 304 aa18.34■□□□□ 0.53
CDHR4-201ENST00000343366 RIPK2O43353 540 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms