RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 OR1A2Q9Y585 309 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 EIF3FO00303 357 aaPredicted RBP17.03■□□□□ 0.32
CLDN4-201ENST00000340958 NPHS1O60500 1241 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 ARFIP2P53365 341 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 HERVK_113P63132 956 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 AGERQ15109 404 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 MAP7D1Q3KQU3 841 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 ARL13AQ5H913 290 aaPredicted RBP17.03■□□□□ 0.32
CLDN4-201ENST00000340958 EGFL8Q99944 293 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 MYOCQ99972 504 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 ERVK-6Q9BXR3 956 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 SHCBP1LQ9BZQ2 653 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 CD93Q9NPY3 652 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 SIT1Q9Y3P8 196 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 LRRK1Q38SD2 2015 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 CHURC1-FNTBB4DL54 471 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 GUCA1CO95843 209 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 DCNP07585 359 aaKnown RBP17.03■□□□□ 0.32
CLDN4-201ENST00000340958 ZNF8P17098 575 aaPredicted RBP17.03■□□□□ 0.32
CLDN4-201ENST00000340958 ACSL1P33121 698 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 SERPINB5P36952 375 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 NFKB2Q00653 900 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 FGL2Q14314 439 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 TGFBIQ15582 683 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 TMEM259Q4ZIN3 620 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 FOXR1Q6PIV2 292 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 OR6Y1Q8NGX8 325 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 RFWD2Q8NHY2 731 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 TRIM54Q9BYV2 358 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 SGK2Q9HBY8 427 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 FZD3Q9NPG1 666 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 ITM2CQ9NQX7 267 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 NUDT4Q9NZJ9 180 aa17.03■□□□□ 0.32
CLDN4-201ENST00000340958 SGTAO43765 313 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 CHRNGP07510 517 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 HIST1H2AGP0C0S8 130 aaPredicted RBP17.02■□□□□ 0.31
CLDN4-201ENST00000340958 MTHFD2P13995 350 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 HIST1H2ADP20671 130 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 EEF1DP29692 281 aaKnown RBP17.02■□□□□ 0.31
CLDN4-201ENST00000340958 PPP2CBP62714 309 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 PPP2CAP67775 309 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 PRKAA1Q13131 559 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 PLA2G4EQ3MJ16 856 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 BCL7AQ4VC05 210 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 ZNF678Q5SXM1 525 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 CFAP206Q8IYR0 622 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 ZNF687Q8N1G0 1237 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 TP53I13Q8NBR0 393 aaPredicted RBP17.02■□□□□ 0.31
CLDN4-201ENST00000340958 OR2T34Q8NGX1 318 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 HIST1H2AHQ96KK5 128 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 HHIPQ96QV1 700 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 SORT1Q99523 831 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 HIST1H2AJQ99878 128 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 H2AFJQ9BTM1 129 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 PNPOQ9NVS9 261 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 RAPGEFL1Q9UHV5 662 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 ADAMTS6Q9UKP5 1117 aa17.02■□□□□ 0.31
CLDN4-201ENST00000340958 TRPM6Q9BX84 2022 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 MUC6Q6W4X9 2439 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 FFAR2O15552 330 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 SNUPNO95149 360 aaKnown RBP17.01■□□□□ 0.31
CLDN4-201ENST00000340958 SIX3O95343 332 aaPredicted RBP17.01■□□□□ 0.31
CLDN4-201ENST00000340958 VCLP18206 1134 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 CCR10P46092 362 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 ALDH18A1P54886 795 aaKnown RBP17.01■□□□□ 0.31
CLDN4-201ENST00000340958 AQP5P55064 265 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 UBE2R2Q712K3 238 aaPredicted RBP17.01■□□□□ 0.31
CLDN4-201ENST00000340958 SPATS2Q86XZ4 545 aaKnown RBP17.01■□□□□ 0.31
CLDN4-201ENST00000340958 ZNF781Q8N8C0 355 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 CFAP61Q8NHU2 1237 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 L3HYPDHQ96EM0 354 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 COX14Q96I36 57 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 LGR4Q9BXB1 951 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 DLGAP2Q9P1A6 1054 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 CYP8B1Q9UNU6 501 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 GPR34Q9UPC5 381 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 RAP2CQ9Y3L5 183 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 OARD1Q9Y530 152 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 USH1CQ9Y6N9 552 aa17.01■□□□□ 0.31
CLDN4-201ENST00000340958 TMEM202A6NGA9 273 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 CACNB4O00305 520 aaPredicted RBP17■□□□□ 0.31
CLDN4-201ENST00000340958 HGSO14964 777 aaPredicted RBP17■□□□□ 0.31
CLDN4-201ENST00000340958 NUAK1O60285 661 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 POP7O75817 140 aaKnown RBP17■□□□□ 0.31
CLDN4-201ENST00000340958 SEMA4FO95754 770 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 C8GP07360 202 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 MPC1LP0DKB6 136 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 ARRB2P32121 409 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 PREPP48147 710 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 ABRQ12979 859 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 IFT88Q13099 833 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 FZD5Q13467 585 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 FBXO48Q5FWF7 155 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 SBSNQ6UWP8 590 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 CYHR1Q6ZMK1 362 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 VRK3Q8IV63 474 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 AFAP1L2Q8N4X5 818 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 FOPNLQ96NB1 174 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 SIKE1Q9BRV8 207 aa17■□□□□ 0.31
CLDN4-201ENST00000340958 TMEM120AQ9BXJ8 343 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms