RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ZDHHC3Q9NYG2 299 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 FAM8A1Q9UBU6 413 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 IL17BQ9UHF5 180 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 CRLS1Q9UJA2 301 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 SPENQ96T58 3664 aaKnown RBP16.64■□□□□ 0.25
BRCC3-202ENST00000340647 CCDC78A2IDD5 438 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 TERTO14746 1132 aaKnown RBP16.64■□□□□ 0.25
BRCC3-202ENST00000340647 POLR1CO15160 346 aaPredicted RBP16.64■□□□□ 0.25
BRCC3-202ENST00000340647 SUN1O94901 812 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 POLBP06746 335 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 NELFEP18615 380 aaKnown RBP16.64■□□□□ 0.25
BRCC3-202ENST00000340647 PDHA2P29803 388 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 HADHAP40939 763 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 HALP42357 657 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 CCZ1BP86790 482 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 CCZ1P86791 482 aaPredicted RBP16.64■□□□□ 0.25
BRCC3-202ENST00000340647 PDE1BQ01064 536 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 DBN1Q16643 649 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 GPR33Q49SQ1 333 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 CCDC38Q502W7 563 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 CACHD1Q5VU97 1274 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 ZNF662Q6ZS27 426 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 CFAP206Q8IYR0 622 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 OR13J1Q8NGT2 312 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 STYXQ8WUJ0 223 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 MED8Q96G25 268 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 SLC41A2Q96JW4 573 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 C12orf66Q96MD2 445 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 MAP3K3Q99759 626 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 IMP3Q9NV31 184 aaKnown RBP16.64■□□□□ 0.25
BRCC3-202ENST00000340647 SLC24A2Q9UI40 661 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 ACSL5Q9ULC5 683 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 FER1L5A0AVI2 2057 aa16.64■□□□□ 0.25
BRCC3-202ENST00000340647 OR5K3A6NET4 321 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 PYCARD-AS1I3L0S3 204 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 ARHGAP6O43182 974 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 ZNF189O75820 626 aaPredicted RBP16.63■□□□□ 0.25
BRCC3-202ENST00000340647 ITGB2P05107 769 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 ZSCAN5DPP0CG00 497 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 FGF5P12034 268 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 FOLR1P15328 257 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 ITGALP20701 1170 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 FOXN2P32314 431 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 SNX1Q13596 522 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 KCNAB1Q14722 419 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 IRGCQ6NXR0 463 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 NLGN4XQ8N0W4 816 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
BRCC3-202ENST00000340647 TXLNBQ8N3L3 684 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 IL22RA1Q8N6P7 574 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 NLGN4YQ8NFZ3 816 aaPredicted RBP16.63■□□□□ 0.25
BRCC3-202ENST00000340647 ULK4Q96C45 1275 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 OR6C1Q96RD1 312 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 COPS8Q99627 209 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 ZPBPQ9BS86 351 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 TLR10Q9BXR5 811 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 KIR3DX1Q9H7L2 352 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 COG4Q9H9E3 785 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 AKIRIN1Q9H9L7 192 aaPredicted RBP16.63■□□□□ 0.25
BRCC3-202ENST00000340647 SLC2A6Q9UGQ3 507 aa16.63■□□□□ 0.25
BRCC3-202ENST00000340647 C17orf113A0A1B0GUU1 675 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 NKX2-8O15522 239 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 FAM87AP0C7U9 286 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 STIP1P31948 543 aaKnown RBP16.62■□□□□ 0.25
BRCC3-202ENST00000340647 ATP1A2P50993 1020 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 GSDMDP57764 484 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 FOXM1Q08050 763 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 SEMA5AQ13591 1074 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 ZRANB3Q5FWF4 1079 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 FBXO38Q6PIJ6 1188 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 ZNF534Q76KX8 674 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 LRRC8AQ8IWT6 810 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 HM13Q8TCT9 377 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 SLC45A3Q96JT2 553 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 TSGA10Q9BZW7 698 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 CASS4Q9NQ75 786 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 MRPS18BQ9Y676 258 aaKnown RBP16.62■□□□□ 0.25
BRCC3-202ENST00000340647 SEC16AO15027 2179 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 CCDC88CQ9P219 2028 aa16.62■□□□□ 0.25
BRCC3-202ENST00000340647 PSMD3O43242 534 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 KRT86O43790 486 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 RASSF9O75901 435 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 TPBGLP0DKB5 382 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 MAP4P27816 1152 aaKnown RBP16.61■□□□□ 0.25
BRCC3-202ENST00000340647 RPL22P35268 128 aaKnown RBP16.61■□□□□ 0.25
BRCC3-202ENST00000340647 STAT5AP42229 794 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 ARCN1P48444 511 aaKnown RBP16.61■□□□□ 0.25
BRCC3-202ENST00000340647 KPNA2P52292 529 aaKnown RBP16.61■□□□□ 0.25
BRCC3-202ENST00000340647 ACVR1Q04771 509 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 CACNG1Q06432 222 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 ABHD18Q0P651 414 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 SEPT6Q14141 434 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 MAP7Q14244 749 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 SEMA3AQ14563 771 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 ZFPM2Q8WW38 1151 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 DCUN1D1Q96GG9 259 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 ZDHHC12Q96GR4 267 aa16.61■□□□□ 0.25
BRCC3-202ENST00000340647 ELMO2Q96JJ3 720 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms