RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 OSGEPQ9NPF4 335 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.25□□□□□ -1.893e-30■■■■■ 247.4
CSMD3-202ENST00000339701 ABCD2Q9UBJ2 740 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SERTAD3Q9UJW9 196 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SPIN1Q9Y657 262 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 AP4B1Q9Y6B7 739 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 WASF2Q9Y6W5 498 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SMLR1H3BR10 107 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 DVL1O14640 695 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LRRN2O75325 713 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FGF18O76093 207 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 APRTP07741 180 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SERPINA6P08185 405 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 VDRP11473 427 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LCP1P13796 627 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ALAS2P22557 587 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 DGKAP23743 735 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ALDH4A1P30038 563 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ARCN1P48444 511 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 DVL1P1P54792 670 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 NAGLUP54802 743 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CDO1Q16878 200 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RAB41Q5JT25 222 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 AKAP14Q86UN6 197 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MMAAQ8IVH4 418 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LPCAT1Q8NF37 534 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GJA10Q969M2 543 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FEM1CQ96JP0 617 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZC3H10Q96K80 434 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TTLL2Q9BWV7 592 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZDHHC5Q9C0B5 715 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SPATA7Q9P0W8 599 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 AURKCQ9UQB9 309 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MAPK8IP1Q9UQF2 711 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 KCNE2Q9Y6J6 123 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PPP1R3GB7ZBB8 358 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 APOC4-APOC2K7ER74 178 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TFECO14948 347 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CHADO15335 359 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 KRT36O76013 467 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 UNC5CO95185 931 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 APOC2P02655 101 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HIST1H2ABP04908 130 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 COL6A1P12109 1028 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PTPRAP18433 802 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GSTM2P28161 218 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 NOS3P29474 1203 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CDH13P55290 713 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PTENP60484 403 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CBX3Q13185 183 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CRY2Q49AN0 593 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CATSPEREQ5SY80 951 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ATG14Q6ZNE5 492 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HIST3H2AQ7L7L0 130 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF554Q86TJ5 538 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 UNC93AQ86WB7 457 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SFR1Q86XK3 245 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 WDR49Q8IV35 697 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZC3H7AQ8IWR0 971 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TEX29Q8N6K0 151 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PNLDC1Q8NA58 520 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FAM47BQ8NA70 645 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 OR6C4Q8NGE1 309 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HIST1H2ACQ93077 130 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM159Q96B96 161 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SMARCD1Q96GM5 515 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RADILQ96JH8 1075 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HSFY1Q96LI6 401 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PHF12Q96QT6 1004 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM47Q9BQJ4 181 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 C19orf12Q9NSK7 152 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GLTPQ9NZD2 209 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 COL20A1Q9P218 1284 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM14AQ9Y6G1 99 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 A0A1B0GVI7 797 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 A0A1W2PQ45 241 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 A0A1W2PQY0 241 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 EIF3FO00303 357 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 KCNN4O15554 427 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ATP9BO43861 1147 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 NDUFB10O96000 172 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 FTH1P02794 183 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 C8AP07357 584 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MAGEA2P43356 314 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CDH11P55287 796 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 STXBP1P61764 594 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HNRNPKP61978 463 aaKnown RBP eCLIP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TLE3Q04726 772 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MZT1Q08AG7 82 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GOLGA7BQ2TAP0 167 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ALG10Q5BKT4 473 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PIGGQ5H8A4 983 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 LCTLQ6UWM7 567 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 CES3Q6UWW8 571 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TDRPQ86YL5 185 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GRAMD1CQ8IYS0 662 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MTURNQ8N3F0 131 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM190Q8WZ59 177 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 USP7Q93009 1102 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 RAB39BQ96DA2 213 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms