RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ALDH3A2P51648 485 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 HSPA14Q0VDF9 509 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 EPS8Q12929 822 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 TP53BP2Q13625 1128 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 COL9A2Q14055 689 aaPredicted RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 MINDY1Q8N5J2 469 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 OR4F6Q8NGB9 312 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ASIC4Q96FT7 647 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 MAGED4Q96JG8 741 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 DMRTB1Q96MA1 342 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 TRMT13Q9NUP7 481 aaKnown RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 PDP1Q9P0J1 537 aaPredicted RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 VAPAQ9P0L0 249 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 GPC6Q9Y625 555 aaPredicted RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 EVPLLA8MZ36 301 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 BTBD19C9JJ37 291 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 CXCR6O00574 342 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ABCB7O75027 752 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 UROSP10746 265 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 RCVRNP35243 200 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 CYP27C1Q4G0S4 372 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 CARNMT1Q8N4J0 409 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 TMEM199Q8N511 208 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 UBE2FQ969M7 185 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ZNF490Q9ULM2 529 aaPredicted RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 LOC100130705A0A1B0GUX0 176 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 SMIM35A0A1B0GVV1 85 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ADAM23O75077 832 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 MLYCDO95822 493 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 GSTT2P0CG29 244 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 GSTT2BP0CG30 244 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 S100A3P33764 101 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 CD97P48960 835 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 CRYBB1P53674 252 aaPredicted RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ERVK-8P63133 956 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 LRRC73Q5JTD7 316 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 UBXN11Q5T124 520 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 FAM171A1Q5VUB5 890 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 LCN8Q6JVE9 175 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 TMC5Q6UXY8 1006 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 STON2Q8WXE9 905 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 NT5C3BQ969T7 300 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ASB2Q96Q27 587 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 RHNO1Q9BSD3 238 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 MFSD1Q9H3U5 465 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 SDR39U1Q9NRG7 319 aaPredicted RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ADARB2Q9NS39 739 aaKnown RBP13.94□□□□□ -0.18
PCDH8-201ENST00000338862 ZNF232Q9UNY5 417 aa13.94□□□□□ -0.18
PCDH8-201ENST00000338862 FZD9O00144 591 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 SNPHO15079 494 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 B3GALT4O96024 378 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 IDUAP35475 653 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 SEMA3BQ13214 749 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 NECAB2Q7Z6G3 386 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 P2RY8Q86VZ1 359 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 SPARTQ8N0X7 666 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 OR2T11Q8NH01 316 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 SELENOMQ8WWX9 145 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 ELOVL6Q9H5J4 265 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
PCDH8-201ENST00000338862 OPTCQ9UBM4 332 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PTBP2Q9UKA9 531 aaKnown RBP13.93□□□□□ -0.18
PCDH8-201ENST00000338862 MYO10Q9HD67 2058 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 AXIN1O15169 862 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 RAD51BO15315 384 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 IL12AP29459 219 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 HPCAL1P37235 193 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 TRAF3Q13114 568 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 ABRAXAS2Q15018 415 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PROSER1Q86XN7 944 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 GPC2Q8N158 579 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PACRGLQ8N7B6 248 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 APOLD1Q96LR9 279 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 NSMCE3Q96MG7 304 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 AARSD1Q9BTE6 412 aaKnown RBP13.93□□□□□ -0.18
PCDH8-201ENST00000338862 CIPCQ9C0C6 399 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 FAM118AQ9NWS6 357 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 UBA2Q9UBT2 640 aaPredicted RBP13.93□□□□□ -0.18
PCDH8-201ENST00000338862 DNAJC25-GNG10A0A024R161 153 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 ALPIP09923 528 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 CDH1P12830 882 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 HTR1BP28222 390 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 AXLP30530 894 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 MAGEA8P43361 318 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 ADAM17P78536 824 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 SCAPQ12770 1279 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 BOP1Q14137 746 aaKnown RBP13.93□□□□□ -0.18
PCDH8-201ENST00000338862 BRMS1LQ5PSV4 323 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PM20D1Q6GTS8 502 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PIANPQ8IYJ0 282 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PIK3C3Q8NEB9 887 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
PCDH8-201ENST00000338862 SLC13A3Q8WWT9 602 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 CHCHD6Q9BRQ6 235 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 GIN1Q9NXP7 522 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 IKZF3Q9UKT9 509 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 PCDHGA11Q9Y5H2 935 aa13.93□□□□□ -0.18
PCDH8-201ENST00000338862 SPO11Q9Y5K1 396 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms