RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 C1orf210Q8IVY1 113 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 SCN4BQ8IWT1 228 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 MAML2Q8IZL2 1156 aaPredicted RBP10.64□□□□□ -0.71
RTN3-201ENST00000338850 ELMOD1Q8N336 334 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 SPATA6LQ8N4H0 392 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 RNF148Q8N7C7 305 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 DRAXINQ8NBI3 349 aaPredicted RBP10.64□□□□□ -0.71
RTN3-201ENST00000338850 PDZD8Q8NEN9 1154 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 OR56A4Q8NGH8 313 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 KCNJ9Q92806 393 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 IGSF8Q969P0 613 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 FBXO32Q969P5 355 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TMEM125Q96AQ2 219 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 MPP4Q96JB8 637 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 C3orf30Q96M34 536 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 ZNF512Q96ME7 567 aaPredicted RBP10.64□□□□□ -0.71
RTN3-201ENST00000338850 ASB16Q96NS5 453 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TUBA1CQ9BQE3 449 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 OSBPL6Q9BZF3 934 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 GRIP2Q9C0E4 1043 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 PCDHAC1Q9H158 963 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 CCDC68Q9H2F9 335 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 CRISPLD1Q9H336 500 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 ATXN3LQ9H3M9 355 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 LTB4R2Q9NPC1 389 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TMEM9Q9P0T7 183 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 HSFX1Q9UBD0 423 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 ZNHIT2Q9UHR6 403 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 MED16Q9Y2X0 877 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 R4GN57 208 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 WDR87Q6ZQQ6 2873 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 CFAP54Q96N23 3096 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 ZFC3H1O60293 1989 aaKnown RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 ILVBLA1L0T0 632 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 SHISA7A6NL88 538 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 FAM170BA6NMN3 283 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 F5H5T6 163 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 NR5A2O00482 541 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ARPC2O15144 300 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 AKAP10O43572 662 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 KDELR3O43731 214 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 VPS26AO75436 327 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 TRMUO75648 421 aaKnown RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 OR6B1O95007 311 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 PRSS23O95084 383 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 LATS1O95835 1130 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 HPRP00739 348 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 CYBBP04839 570 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 CD72P21854 359 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 RPS3P23396 243 aaKnown RBP eCLIP10.63□□□□□ -0.719e-10■■■■□ 20.7
RTN3-201ENST00000338850 HNRNPFP52597 415 aaKnown RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 PLK1P53350 603 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 PGGT1BP53609 377 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 KCNK10P57789 538 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 MAXP61244 160 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 GNA12Q03113 381 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ITKQ08881 620 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 EPS8Q12929 822 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 RALGDSQ12967 914 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 GPR17Q13304 367 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 SEMA3AQ14563 771 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 UBXN2BQ14CS0 331 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 PCBP2Q15366 365 aaKnown RBP eCLIP10.63□□□□□ -0.713e-35■■■■■ 31.2
RTN3-201ENST00000338850 SLC36A3Q495N2 470 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 SETMARQ53H47 684 aaPredicted RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 TBCELQ5QJ74 424 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 CLEC6AQ6EIG7 209 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 TTC23LQ6PF05 361 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 USP51Q70EK9 711 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 GALNT4Q8N4A0 578 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 FAM156AQ8NDB6 213 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 OR9I1Q8NGQ6 314 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 CANT1Q8WVQ1 401 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 DNASE1L2Q92874 299 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 SMARCD2Q92925 531 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ISG20Q96AZ6 181 aaKnown RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 PLD4Q96BZ4 506 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ZSWIM3Q96MP5 696 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 CCDC115Q96NT0 180 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 RPRD1AQ96P16 312 aaPredicted RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 DOK1Q99704 481 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 TMEM79Q9BSE2 394 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ADI1Q9BV57 179 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 TDRD1Q9BXT4 1180 aaKnown RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 LRRC3Q9BY71 257 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 TUBB1Q9H4B7 451 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ZFP14Q9HCL3 533 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ACSS2Q9NR19 701 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ASAH2Q9NR71 780 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 CMTM6Q9NX76 183 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ASIC5Q9NY37 505 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 ABI2Q9NYB9 513 aaPredicted RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 MAGEL2Q9UJ55 1249 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 APPL1Q9UKG1 709 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 PCTPQ9UKL6 214 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 PCDHB1Q9Y5F3 818 aa10.63□□□□□ -0.71
RTN3-201ENST00000338850 TNPO3Q9Y5L0 923 aaKnown RBP10.63□□□□□ -0.71
RTN3-201ENST00000338850 GPR179Q6PRD1 2367 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms