RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 RHOAP61586 193 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 KCTD21Q4G0X4 260 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 ANKRD34AQ69YU3 496 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 RIMKLAQ8IXN7 391 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 FAM126BQ8IXS8 530 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 TBC1D21Q8IYX1 336 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 DHRSXQ8N5I4 330 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 APOL5Q9BWW9 433 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 NPLQ9BXD5 320 aaPredicted RBP13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 SEZ6LQ9BYH1 1024 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 ABCG8Q9H221 673 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 HEBP1Q9NRV9 189 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 COMMD8Q9NX08 183 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 CCL27Q9Y4X3 112 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 C5orf42Q9H799 3197 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 A0A087WXM4 84 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 TRIM64CA6NLI5 447 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 H7C4K7 107 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 TRIM16O95361 564 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PRAMEF1O95521 474 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 LDLRP01130 860 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SELPP16109 830 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 HMGCLP35914 325 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 POLR2IP36954 125 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SH3BGRP55822 239 aaPredicted RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PPP1R8Q12972 351 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 FXNQ16595 210 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SGO1Q5FBB7 561 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ERI1Q8IV48 349 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 DPP10Q8N608 796 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ISOC1Q96CN7 298 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CGREF1Q99674 301 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CLSTN3Q9BQT9 956 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 NAA50Q9GZZ1 169 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CWH43Q9H720 699 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 VPS51Q9UID3 782 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC30A1Q9Y6M5 507 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CDH23Q9H251 3354 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 KLHL33A6NCF5 533 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 TRIM64A6NGJ6 449 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC2A4P14672 509 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CD9P21926 228 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ADARP55265 1226 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 RPL38P63173 70 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CACNG1Q06432 222 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 KIAA0040Q15053 153 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PCBP2Q15366 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 NKG7Q16617 165 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC8B1Q6J4K2 584 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CHST9Q7L1S5 443 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 GPR141Q7Z602 305 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ITIH5Q86UX2 942 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 KRTCAP2Q8N6L1 136 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 BPIFB1Q8TDL5 484 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 C12orf43Q96C57 262 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 NSMCE2Q96MF7 247 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ZNF583Q96ND8 569 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 KLF16Q9BXK1 252 aaPredicted RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 NUDT4Q9NZJ9 180 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CLDN7O95471 211 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ELK4P28324 431 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 CAPGP40121 348 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 LHX8Q68G74 356 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PTRHD1Q6GMV3 140 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 MILR1Q7Z6M3 343 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 HS3ST5Q8IZT8 346 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 APCDD1Q8J025 514 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PMM1Q92871 262 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PLD4Q96BZ4 506 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SCLYQ96I15 445 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 MUS81Q96NY9 551 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ELAC1Q9H777 363 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 TRPM5Q9NZQ8 1165 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 ABT1Q9ULW3 272 aaKnown RBP13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 PHF24Q9UPV7 400 aa13.2□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC25A14O95258 325 aaPredicted RBP13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ATE1O95260 518 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 PARNO95453 639 aaKnown RBP13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 NFKBIAP25963 317 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 CSKP41240 450 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC44A4Q53GD3 710 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ENPP6Q6UWR7 440 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 CLHC1Q8NHS4 586 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 SGCDQ92629 289 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ASB8Q9H765 288 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 IL26Q9NPH9 171 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC6A13Q9NSD5 602 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ZNF639Q9UID6 485 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms