RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CSNK1G3Q9Y6M4 447 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 V9GYQ6 96 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 ZFC3H1O60293 1989 aaKnown RBP11.69□□□□□ -0.54
SHMT2-201ENST00000328923 AQP12BA6NM10 295 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 MRASO14807 208 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 KCNN4O15554 427 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 APRTP07741 180 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 TCF3P15923 654 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 RPL14P50914 215 aaKnown RBP11.69□□□□□ -0.54
SHMT2-201ENST00000328923 GBX2P52951 348 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-201ENST00000328923 PTPRRQ15256 657 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 CYP51A1Q16850 503 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 PIK3R6Q5UE93 754 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 HDDC2Q7Z4H3 204 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 TMC8Q8IU68 726 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 AQP12AQ8IXF9 295 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 YIPF5Q969M3 257 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 LRCH3Q96II8 777 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 ELMO2Q96JJ3 720 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 TRNT1Q96Q11 434 aaKnown RBP11.69□□□□□ -0.54
SHMT2-201ENST00000328923 GATA5Q9BWX5 397 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-201ENST00000328923 HPF1Q9NWY4 346 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 ZDHHC2Q9UIJ5 367 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 USP18Q9UMW8 372 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 SLC45A1Q9Y2W3 748 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 HES2Q9Y543 173 aa11.69□□□□□ -0.54
SHMT2-201ENST00000328923 PIPSLA2A3N6 862 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 DGAT1O75907 488 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 LRIG2O94898 1065 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ATG7O95352 703 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 STAU1O95793 577 aaKnown RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 C1QBP02746 253 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 THRBP10828 461 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 TFEBP19484 476 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 RAB3AP20336 220 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 CD6P30203 668 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 HNF4AP41235 474 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 RPS5P46782 204 aaKnown RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 CCT3P49368 545 aaKnown RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 HOXA1P49639 335 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 AP1S2P56377 157 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 STX5Q13190 355 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 PRPSAP1Q14558 356 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 CLCA4Q14CN2 919 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 AAK1Q2M2I8 961 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 AGKQ53H12 422 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 DCAF15Q66K64 600 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 CPXCR1Q8N123 301 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 GPC2Q8N158 579 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 PLD6Q8N2A8 252 aaKnown RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ISL2Q96A47 359 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 UBXN10Q96LJ8 280 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 SPNS1Q9H2V7 528 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ASB7Q9H672 318 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 KAT8Q9H7Z6 458 aaKnown RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 NIPAL2Q9H841 368 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 IL1RL2Q9HB29 575 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 PDLIM7Q9NR12 457 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 TCEAL9Q9UHQ7 104 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 PARP14Q460N5 1801 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ADGRA2Q96PE1 1338 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 DSCR3O14972 297 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 INPP4BO15327 924 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 SNX4O95219 450 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 PGLSO95336 258 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 LDLRP01130 860 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 NPPAP01160 153 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 EPOP01588 193 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 CYBBP04839 570 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 POU1F1P28069 291 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 PIGAP37287 484 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 DGKQP52824 942 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ARSFP54793 590 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 GRM1Q13255 1194 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ARMC4Q5T2S8 1044 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 NPNTQ6UXI9 565 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 BNIPLQ7Z465 357 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 TSPYL5Q86VY4 417 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 IL31RAQ8NI17 732 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 MCOLN3Q8TDD5 553 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 DNAJA4Q8WW22 397 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ATOH1Q92858 354 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 SGTBQ96EQ0 304 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 SCYL1Q96KG9 808 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 TTPALQ9BTX7 342 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-201ENST00000328923 NIF3L1Q9GZT8 377 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 BFARQ9NZS9 450 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ZNF639Q9UID6 485 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 ACOT9Q9Y305 439 aa11.68□□□□□ -0.54
SHMT2-201ENST00000328923 TMEM233B4DJY2 109 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 G3V2L1 256 aa11.67□□□□□ -0.54
SHMT2-201ENST00000328923 NME4O00746 187 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms