RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 LGR4Q9BXB1 951 aa18.46■□□□□ 0.55
EXOSC3-201ENST00000327304 TFB2MQ9H5Q4 396 aaKnown RBP18.46■□□□□ 0.55
EXOSC3-201ENST00000327304 WDR26Q9H7D7 661 aa18.46■□□□□ 0.55
EXOSC3-201ENST00000327304 PNPOQ9NVS9 261 aa18.46■□□□□ 0.55
EXOSC3-201ENST00000327304 NCKIPSDQ9NZQ3 722 aa18.46■□□□□ 0.55
EXOSC3-201ENST00000327304 CAPN7Q9Y6W3 813 aa18.46■□□□□ 0.55
EXOSC3-201ENST00000327304 CCDC163A0A0D9SF12 145 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 CCDC189A1A4V9 331 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 VPS26AO75436 327 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 IPO13O94829 963 aaKnown RBP18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 MSH3P20585 1137 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 RPS3P23396 243 aaKnown RBP eCLIP18.45■□□□□ 0.549e-10■■■■□ 25.3
EXOSC3-201ENST00000327304 TRIM23P36406 574 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 NSG1P42857 185 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 NCALDP61601 193 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 RPL6Q02878 288 aaKnown RBP18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 SNX19Q92543 992 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 FAM136AQ96C01 138 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 DCUN1D1Q96GG9 259 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 CNDP1Q96KN2 507 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 TEX101Q9BY14 249 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 UNKQ9C0B0 810 aaKnown RBP18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 DERL2Q9GZP9 239 aa18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.45■□□□□ 0.54
EXOSC3-201ENST00000327304 POM121BA6NF01 834 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 CFAP73A6NFT4 308 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 IQCF5A8MTL0 148 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 H0Y8X5 98 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 HNRNPCL1O60812 293 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 CCDC22O60826 627 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 NIPSNAP2O75323 286 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ATP6V0D1P61421 351 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 NFKB2Q00653 900 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 PRKAA1Q13131 559 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 UGT3A1Q6NUS8 523 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ADGRG6Q86SQ4 1221 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 WDR5BQ86VZ2 330 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 NKAPQ8N5F7 415 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ZNF781Q8N8C0 355 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 LKAAEAR1Q8TD35 194 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ORAI3Q9BRQ5 295 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 FAM86C2PA6NEL3 165 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 A8MT66 165 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 SLCO1B7G3V0H7 640 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ZNF195O14628 629 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 SGTAO43765 313 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ATP1B2P14415 290 aaPredicted RBP18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 AKT2P31751 481 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 TMEM115Q12893 351 aaPredicted RBP18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 KRT72Q14CN4 511 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ARL13AQ5H913 290 aaPredicted RBP18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 PTRHD1Q6GMV3 140 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 DOK6Q6PKX4 331 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 GCNT7Q6ZNI0 430 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 RASGEF1AQ8N9B8 481 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 TMEM145Q8NBT3 493 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 STON2Q8WXE9 905 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 SGF29Q96ES7 293 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 PCED1AQ9H1Q7 454 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 OR2AG1Q9H205 316 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 ALG9Q9H6U8 611 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 GALPQ9UBC7 116 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 GNPTGQ9UJJ9 305 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 APOBEC2Q9Y235 224 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 TMEM98Q9Y2Y6 226 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 SLCO1B1Q9Y6L6 691 aa18.44■□□□□ 0.54
EXOSC3-201ENST00000327304 METTL12A8MUP2 240 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 CFAP99D6REC4 459 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 FPGTO14772 594 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 MAP3K13O43283 966 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 ZBTB14O43829 449 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 CTSCP53634 463 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 PAQR3Q6TCH7 311 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 SLC36A4Q6YBV0 504 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 MACC1Q6ZN28 852 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 CADM4Q8NFZ8 388 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 PTERQ96BW5 349 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 BMFQ96LC9 184 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 RILPQ96NA2 401 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 GPR21Q99679 349 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 APOOQ9BUR5 198 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 TRIM39Q9HCM9 518 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 PHPT1Q9NRX4 125 aaPredicted RBP18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 ATXN10Q9UBB4 475 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 TRMT6Q9UJA5 497 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 DMTF1Q9Y222 760 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 ABCA7Q8IZY2 2146 aa18.43■□□□□ 0.54
EXOSC3-201ENST00000327304 A0A1W2PPC4 97 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 H0YHG0 523 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 FCHO1O14526 889 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 GPR37L1O60883 481 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 SERPINA6P08185 405 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 TPBGLP0DKB5 382 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 ITGB6P18564 788 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 AVPR2P30518 371 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 RASSF2P50749 326 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 RPL14P50914 215 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 GALNT1Q10472 559 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 CFAP157Q5JU67 520 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 ASRGL1Q7L266 308 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms