RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 KIAA0930Q6ICG6 404 aaPredicted RBP15.06■□□□□ 0
VARS2-201ENST00000321897 SYT12Q8IV01 421 aa15.06■□□□□ 0
VARS2-201ENST00000321897 C2orf49Q9BVC5 232 aaPredicted RBP15.06■□□□□ 0
VARS2-201ENST00000321897 TMEM39AQ9NV64 488 aa15.06■□□□□ 0
VARS2-201ENST00000321897 TBCCD1Q9NVR7 557 aa15.06■□□□□ 0
VARS2-201ENST00000321897 PRKAB1Q9Y478 270 aa15.06■□□□□ 0
VARS2-201ENST00000321897 C7orf72A4D263 438 aa15.06■□□□□ 0
VARS2-201ENST00000321897 ACSL4O60488 711 aa15.06■□□□□ 0
VARS2-201ENST00000321897 CDKN1CP49918 316 aaPredicted RBP15.06■□□□□ 0
VARS2-201ENST00000321897 VBP1P61758 197 aa15.06■□□□□ 0
VARS2-201ENST00000321897 PHC1P78364 1004 aa15.06■□□□□ 0
VARS2-201ENST00000321897 UPP1Q16831 310 aa15.06■□□□□ 0
VARS2-201ENST00000321897 TMEM135Q86UB9 458 aa15.06■□□□□ 0
VARS2-201ENST00000321897 P2RY8Q86VZ1 359 aa15.06■□□□□ 0
VARS2-201ENST00000321897 KCTD13Q8WZ19 329 aa15.06■□□□□ 0
VARS2-201ENST00000321897 MRGPRX2Q96LB1 330 aa15.06■□□□□ 0
VARS2-201ENST00000321897 LEF1Q9UJU2 399 aaPredicted RBP15.06■□□□□ 0
VARS2-201ENST00000321897 EFCAB10A6NFE3 127 aa15.05■□□□□ 0
VARS2-201ENST00000321897 ARPC2O15144 300 aa15.05■□□□□ 0
VARS2-201ENST00000321897 TCEA1P23193 301 aaKnown RBP15.05■□□□□ 0
VARS2-201ENST00000321897 CSTF3Q12996 717 aaKnown RBP15.05■□□□□ 0
VARS2-201ENST00000321897 GRB7Q14451 532 aa15.05■□□□□ 0
VARS2-201ENST00000321897 ACOX1Q15067 660 aa15.05■□□□□ 0
VARS2-201ENST00000321897 NIPAL1Q6NVV3 410 aa15.05■□□□□ 0
VARS2-201ENST00000321897 ANKS3Q6ZW76 656 aa15.05■□□□□ 0
VARS2-201ENST00000321897 EEF1AKMT1Q8WVE0 214 aa15.05■□□□□ 0
VARS2-201ENST00000321897 CHCHD6Q9BRQ6 235 aa15.05■□□□□ 0
VARS2-201ENST00000321897 CACYBPQ9HB71 228 aaKnown RBP15.05■□□□□ 0
VARS2-201ENST00000321897 TMEM30AQ9NV96 361 aa15.05■□□□□ 0
VARS2-201ENST00000321897 ADGRE2Q9UHX3 823 aa15.05■□□□□ 0
VARS2-201ENST00000321897 AOC2O75106 756 aa15.05■□□□□ -0
VARS2-201ENST00000321897 ENO2P09104 434 aaPredicted RBP15.05■□□□□ -0
VARS2-201ENST00000321897 CKBP12277 381 aa15.05■□□□□ -0
VARS2-201ENST00000321897 ZNF135P52742 658 aaPredicted RBP15.05■□□□□ -0
VARS2-201ENST00000321897 NIPAL4Q0D2K0 466 aa15.05■□□□□ -0
VARS2-201ENST00000321897 ACAP2Q15057 778 aa15.05■□□□□ -0
VARS2-201ENST00000321897 CEP78Q5JTW2 689 aa15.05■□□□□ -0
VARS2-201ENST00000321897 DENND5AQ6IQ26 1287 aa15.05■□□□□ -0
VARS2-201ENST00000321897 SUN5Q8TC36 379 aa15.05■□□□□ -0
VARS2-201ENST00000321897 TRIB2Q92519 343 aa15.05■□□□□ -0
VARS2-201ENST00000321897 ZFYVE1Q9HBF4 777 aa15.05■□□□□ -0
VARS2-201ENST00000321897 CFAP97Q9P2B7 532 aa15.05■□□□□ -0
VARS2-201ENST00000321897 HMX2A2RU54 273 aa15.05■□□□□ -0
VARS2-201ENST00000321897 ZNF284Q2VY69 593 aa15.05■□□□□ -0
VARS2-201ENST00000321897 ZCCHC8Q6NZY4 707 aaKnown RBP15.05■□□□□ -0
VARS2-201ENST00000321897 DUS1LQ6P1R4 473 aaKnown RBP15.05■□□□□ -0
VARS2-201ENST00000321897 RD3Q7Z3Z2 195 aa15.05■□□□□ -0
VARS2-201ENST00000321897 SVOPQ8N4V2 548 aa15.05■□□□□ -0
VARS2-201ENST00000321897 CAMKK1Q8N5S9 505 aa15.05■□□□□ -0
VARS2-201ENST00000321897 FBXO22Q8NEZ5 403 aa15.05■□□□□ -0
VARS2-201ENST00000321897 TMEM159Q96B96 161 aa15.05■□□□□ -0
VARS2-201ENST00000321897 SMURF2Q9HAU4 748 aa15.05■□□□□ -0
VARS2-201ENST00000321897 ZDHHC7Q9NXF8 308 aa15.05■□□□□ -0
VARS2-201ENST00000321897 RGS17Q9UGC6 210 aaPredicted RBP15.05■□□□□ -0
VARS2-201ENST00000321897 GNPTGQ9UJJ9 305 aa15.05■□□□□ -0
VARS2-201ENST00000321897 INSIG1O15503 277 aa15.04■□□□□ -0
VARS2-201ENST00000321897 XPNPEP2O43895 674 aa15.04■□□□□ -0
VARS2-201ENST00000321897 UFM1P61960 85 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ACSM2AQ08AH3 577 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ACSM2BQ68CK6 577 aa15.04■□□□□ -0
VARS2-201ENST00000321897 KLHL17Q6TDP4 642 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ENKURQ8TC29 256 aa15.04■□□□□ -0
VARS2-201ENST00000321897 UPF1Q92900 1129 aaKnown RBP eCLIP15.04■□□□□ -0
VARS2-201ENST00000321897 SORT1Q99523 831 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ZNF221Q9UK13 617 aa15.04■□□□□ -0
VARS2-201ENST00000321897 KLHL20Q9Y2M5 609 aa15.04■□□□□ -0
VARS2-201ENST00000321897 CPQQ9Y646 472 aa15.04■□□□□ -0
VARS2-201ENST00000321897 TTC3P53804 2025 aa15.04■□□□□ -0
VARS2-201ENST00000321897 BHMG1C9JSJ3 638 aaPredicted RBP15.04■□□□□ -0
VARS2-201ENST00000321897 TMX2-CTNND1H3BSU7 103 aa15.04■□□□□ -0
VARS2-201ENST00000321897 MAFKO60675 156 aa15.04■□□□□ -0
VARS2-201ENST00000321897 SEMA3DO95025 777 aa15.04■□□□□ -0
VARS2-201ENST00000321897 DIRAS1O95057 198 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ANXA6P08133 673 aa15.04■□□□□ -0
VARS2-201ENST00000321897 SMIM18P0DKX4 95 aa15.04■□□□□ -0
VARS2-201ENST00000321897 CD97P48960 835 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ACLYP53396 1101 aa15.04■□□□□ -0
VARS2-201ENST00000321897 CDKN2DP55273 166 aa15.04■□□□□ -0
VARS2-201ENST00000321897 FAM174BQ3ZCQ3 159 aa15.04■□□□□ -0
VARS2-201ENST00000321897 DGKKQ5KSL6 1271 aa15.04■□□□□ -0
VARS2-201ENST00000321897 PIK3R6Q5UE93 754 aa15.04■□□□□ -0
VARS2-201ENST00000321897 SLC2A7Q6PXP3 512 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ERMP1Q7Z2K6 904 aa15.04■□□□□ -0
VARS2-201ENST00000321897 GPR180Q86V85 440 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ADHFE1Q8IWW8 467 aa15.04■□□□□ -0
VARS2-201ENST00000321897 APOL4Q9BPW4 351 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ZNF490Q9ULM2 529 aaPredicted RBP15.04■□□□□ -0
VARS2-201ENST00000321897 ZNF510Q9Y2H8 683 aa15.04■□□□□ -0
VARS2-201ENST00000321897 KRT87PA6NCN2 255 aa15.04■□□□□ -0
VARS2-201ENST00000321897 A6NL46 340 aa15.04■□□□□ -0
VARS2-201ENST00000321897 NEDD8-MDP1E9PL57 170 aa15.04■□□□□ -0
VARS2-201ENST00000321897 ECI2O75521 394 aa15.04■□□□□ -0
VARS2-201ENST00000321897 COX7A2P14406 83 aa15.04■□□□□ -0
VARS2-201ENST00000321897 MSH3P20585 1137 aa15.04■□□□□ -0
VARS2-201ENST00000321897 NR4A2P43354 598 aa15.04■□□□□ -0
VARS2-201ENST00000321897 POLR2JP52435 117 aaKnown RBP15.04■□□□□ -0
VARS2-201ENST00000321897 LCP2Q13094 533 aa15.04■□□□□ -0
VARS2-201ENST00000321897 USP41Q3LFD5 358 aa15.04■□□□□ -0
VARS2-201ENST00000321897 PDZK1Q5T2W1 519 aa15.04■□□□□ -0
VARS2-201ENST00000321897 DCDC5Q6ZRR9 648 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms