RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RAI2Q9Y5P3 530 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 MATN4O95460 622 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 CYP11A1P05108 521 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 PRKACGP22612 351 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 MZF1P28698 734 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 AGTR2P50052 363 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 NPTX1Q15818 432 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 SLC36A3Q495N2 470 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 FAM151BQ6UXP7 276 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 SCAIQ8N9R8 606 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 ATAD1Q8NBU5 361 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 PGAP3Q96FM1 320 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 RDH12Q96NR8 316 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 GIMAP4Q9NUV9 329 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 SMPD4Q9NXE4 827 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 ARIH1Q9Y4X5 557 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 SAGE2PA6NJ88 616 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 GABBR2O75899 941 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 IL6P05231 212 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 UGT2B4P06133 528 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 AKR1A1P14550 325 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 RRM2P31350 389 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 IFNA8P32881 189 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 ATP6V1E1P36543 226 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 RXRGP48443 463 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 PIGFQ07326 219 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 HSPA14Q0VDF9 509 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 NHSL2Q5HYW2 709 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 RETSATQ6NUM9 610 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 TTC29Q8NA56 475 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 SMG8Q8ND04 991 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 TM6SF2Q9BZW4 377 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 CXCL16Q9H2A7 254 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 PGAP2Q9UHJ9 254 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 RAPGEFL1Q9UHV5 662 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 EVPLQ92817 2033 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 EFCAB10A6NFE3 127 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 TBX1O43435 398 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 IDH3BO43837 385 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 AIREO43918 545 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 ESR1P03372 595 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 TACR2P21452 398 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 GGT5P36269 586 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 FBXL22Q6P050 247 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 SLC44A2Q8IWA5 706 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 RBFAQ8N0V3 343 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 PCDHB1Q9Y5F3 818 aa12.57□□□□□ -0.4
DNMT3A-202ENST00000321117 NUP205Q92621 2012 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 TAF4O00268 1085 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 EEDO75530 441 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 IFNA14P01570 189 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 GRK4P32298 578 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 MAPKAPK2P49137 400 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 IRF8Q02556 426 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 UBE3AQ05086 875 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 GRIK2Q13002 908 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 OR4D1Q15615 310 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 SPDYE7PQ495Y7 208 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 DENND1CQ8IV53 801 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 hCG_2039718K7EN88 272 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 STX16O14662 325 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 INSIG1O15503 277 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 CNTN5O94779 1100 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 ALDOCP09972 364 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 CYP2A7P20853 494 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 CHI3L1P36222 383 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 CD97P48960 835 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 HMGCS1Q01581 520 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 BCL2L1Q07817 233 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 TAF1AQ15573 450 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 GPR162Q16538 588 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 RRM2BQ7LG56 351 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 KRT73Q86Y46 540 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 TMEM125Q96AQ2 219 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 PTERQ96BW5 349 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 APOLD1Q96LR9 279 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 POPDC3Q9HBV1 291 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 MAGEE1Q9HCI5 957 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 PCDHB3Q9Y5E6 796 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 F8W810 466 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 H7C4K7 107 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 FGF4P08620 206 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 PTGER3P43115 390 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 KIR3DL1P43629 444 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 ARCN1P48444 511 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 TTC23LQ6PF05 361 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 DCDC5Q6ZRR9 648 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 SYVN1Q86TM6 617 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 PIK3C3Q8NEB9 887 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 ZNF599Q96NL3 588 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 C11orf84Q9BUA3 381 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 DNMT3LQ9UJW3 386 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms