RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 RMND5BQ96G75 393 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-201ENST00000317677 SERPINI1Q99574 410 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 RPF2Q9H7B2 306 aaKnown RBP12.88□□□□□ -0.35
CPNE1-201ENST00000317677 MAGEE1Q9HCI5 957 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 GALPQ9UBC7 116 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 SLCO3A1Q9UIG8 710 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 COL4A3Q01955 1670 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 A0A0J9YYE9 177 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 CFAP99D6REC4 459 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 H7C0S8 307 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 IGSF6O95976 241 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TRBC1P01850 177 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 LTA4HP09960 611 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 ENDOUP21128 410 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 BCL2L1Q07817 233 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 ATP1A4Q13733 1029 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 KCNC3Q14003 757 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 AAK1Q2M2I8 961 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TCEAL5Q5H9L2 206 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 AGAP7PQ5VUJ5 663 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 KIAA0907Q7Z7F0 614 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 WDR75Q8IWA0 830 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 HIPK4Q8NE63 616 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 OR7G1Q8NGA0 311 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 GABPB2Q8TAK5 448 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 PTERQ96BW5 349 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 CCDC124Q96CT7 223 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TSPAN17Q96FV3 270 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TSNARE1Q96NA8 513 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 MRPL57Q9BQC6 102 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 RTKNQ9BST9 563 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 INTS10Q9NVR2 710 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 APOBEC2Q9Y235 224 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 SLC22A1O15245 554 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 STX7O15400 261 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 OR1I1O60431 355 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 ATE1O95260 518 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 PAPLNO95428 1278 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 MPSTP25325 297 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 CTBSQ01459 385 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 SEMG2Q02383 582 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 CYP2A13Q16696 494 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TRIM16LQ309B1 348 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TCHHL1Q5QJ38 904 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 ANKRD26P1Q6NSI1 321 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TMC5Q6UXY8 1006 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 GALNT4Q8N4A0 578 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 NAT16Q8N8M0 369 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TMEM102Q8N9M5 508 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 PDPRQ8NCN5 879 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 MAPK15Q8TD08 544 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 SMG7Q92540 1137 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 TAMM41Q96BW9 452 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 ASIC4Q96FT7 647 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 SLC30A3Q99726 388 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 C1orf50Q9BV19 199 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 CDH19Q9H159 772 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 HACD3Q9P035 362 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 MARK1Q9P0L2 795 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 MID2Q9UJV3 735 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 FNDC3AQ9Y2H6 1198 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
CPNE1-201ENST00000317677 PLXNB3Q9ULL4 1909 aa12.87□□□□□ -0.35
CPNE1-201ENST00000317677 NCOR1O75376 2440 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 KIF26AQ9ULI4 1882 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-201ENST00000317677 CXorf51AA0A1B0GTR3 108 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 UBA6A0AVT1 1052 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-201ENST00000317677 H3BMM5 538 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 ZBTB14O43829 449 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 SOCS5O75159 536 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 STAMBPO95630 424 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 FMO4P31512 558 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 HNF1BP35680 557 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 HMGCLP35914 325 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 NAGLUP54802 743 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 GRSF1Q12849 480 aaKnown RBP eCLIP12.86□□□□□ -0.352e-22■□□□□ 10
CPNE1-201ENST00000317677 DUSP6Q16828 381 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 GEN1Q17RS7 908 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 CTSL3PQ5NE16 218 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 FAM219BQ5XKK7 198 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 PDE12Q6L8Q7 609 aaKnown RBP12.86□□□□□ -0.35
CPNE1-201ENST00000317677 ISLR2Q6UXK2 745 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 ISCA2Q86U28 154 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 TSPAN33Q86UF1 283 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 BPHLQ86WA6 291 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-201ENST00000317677 LILRA2Q8N149 483 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 CHST14Q8NCH0 376 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 ECHDC3Q96DC8 303 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 MRGPRX3Q96LB0 322 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 MOV10Q9HCE1 1003 aaKnown RBP12.86□□□□□ -0.35
CPNE1-201ENST00000317677 PRDM6Q9NQX0 595 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 TTC28Q96AY4 2481 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 C5orf42Q9H799 3197 aa12.86□□□□□ -0.35
CPNE1-201ENST00000317677 A8MT66 165 aa12.85□□□□□ -0.35
CPNE1-201ENST00000317677 TTC34A8MYJ7 566 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms