RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 AQP6Q13520 282 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 TUBA3CQ13748 450 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 ZNF362Q5T0B9 420 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 GTF2IRD2BQ6EKJ0 949 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 TIGD7Q6NT04 549 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 LDB1Q86U70 411 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 GTF2IRD2Q86UP8 949 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 TCEAL8Q8IYN2 117 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 OSCP1Q8WVF1 389 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 L3HYPDHQ96EM0 354 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 SH3YL1Q96HL8 342 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 MRGPRX2Q96LB1 330 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 CHID1Q9BWS9 393 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 DGCR6LQ9BY27 220 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 TRIM54Q9BYV2 358 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 OAS3Q9Y6K5 1087 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 XIRP2A4UGR9 3374 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 CLDN25C9JDP6 229 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 CDK14O94921 469 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 MYOGP15173 224 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 SLC11A2P49281 568 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 ZNF33AQ06730 810 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 SERINC3Q13530 473 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 TMEM207Q6UWW9 146 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 R3HCC1LQ7Z5L2 792 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 PIM3Q86V86 326 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 SNX29P2Q8IUI4 249 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 PHYKPLQ8IUZ5 450 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 C7orf61Q8IZ16 206 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 RYBPQ8N488 228 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 SLC22A17Q8WUG5 538 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 TSPAN17Q96FV3 270 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 CCDC138Q96M89 665 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 MROQ9BYG7 248 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 PRKAG2Q9UGJ0 569 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 ZNF639Q9UID6 485 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 PTPRSQ13332 1948 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 MYLKQ15746 1914 aa16.95■□□□□ 0.3
SCAMP4-201ENST00000316097 LINC00032P0C843 101 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 ZNF24P17028 368 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 HPCAL1P37235 193 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 DIO3P55073 304 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 SMAD3P84022 425 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 ZNF846Q147U1 533 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 TMEM240Q5SV17 173 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 BLOC1S3Q6QNY0 202 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 GAREM2Q75VX8 874 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 ISCA2Q86U28 154 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 KLHDC8BQ8IXV7 354 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 SCAIQ8N9R8 606 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 PAPD5Q8NDF8 572 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 SH3RF2Q8TEC5 729 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 PTCD2Q8WV60 388 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 BIRC7Q96CA5 298 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 BDH2Q9BUT1 245 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 KLF16Q9BXK1 252 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 SMG9Q9H0W8 520 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 IL21Q9HBE4 155 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 SDR39U1Q9NRG7 319 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 SACM1LQ9NTJ5 587 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 MAGED1Q9Y5V3 778 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 AZIN1O14977 448 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 EFCAB14O75071 495 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 MATN4O95460 622 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 F11P03951 625 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 LBPP18428 481 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 GABRR2P28476 465 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 RENBPP51606 427 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 ARSFP54793 590 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 CDKN2DP55273 166 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 HERVK_113P63132 956 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 OCA2Q04671 838 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 FPGSQ05932 587 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 PIGFQ07326 219 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 FOXM1Q08050 763 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 IMPG1Q17R60 797 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 CRTC3Q6UUV7 619 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 KIAA0408Q6ZU52 694 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 PTRH1Q86Y79 214 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 PTGR2Q8N8N7 351 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 EXOC2Q96KP1 924 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 TCF25Q9BQ70 676 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 FUNDC2Q9BWH2 189 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 ERVK-6Q9BXR3 956 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 TUBB1Q9H4B7 451 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 RMI1Q9H9A7 625 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 POLG2Q9UHN1 485 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 PCDHGA11Q9Y5H2 935 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 DOCK4Q8N1I0 1966 aa16.94■□□□□ 0.3
SCAMP4-201ENST00000316097 H3BNC9 293 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 BCAS1O75363 584 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 CTSAP10619 480 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 UMPSP11172 480 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 CRHBPP24387 322 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 ADRA1AP35348 466 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 GEMP55040 296 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 WNT3AP56704 352 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 PAGE3Q5JUK9 113 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 PLPP4Q5VZY2 271 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 SPARTQ8N0X7 666 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms