RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 EURLQ9NYK6 297 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 COL4A5P29400 1685 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 A0A088AWK7 358 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 RECQL5O94762 991 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-201ENST00000314191 IFNA14P01570 189 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 GABRB3P28472 473 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 ADHFE1Q8IWW8 467 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.09□□□□□ -1.436e-7■□□□□ 9.3
PRKDC-201ENST00000314191 ROPN1LQ96C74 230 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 LOC730098B7Z3J9 87 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 NEK2P51955 445 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 ERVK-8P63133 956 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 SLC5A9Q2M3M2 681 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 SNRNP27Q8WVK2 155 aaKnown RBP6.09□□□□□ -1.43
PRKDC-201ENST00000314191 REXO5Q96IC2 774 aaKnown RBP6.09□□□□□ -1.43
PRKDC-201ENST00000314191 BBS4Q96RK4 519 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 DYTNA2CJ06 578 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 PSMD8P48556 350 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 LIN52Q52LA3 116 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 DENND5AQ6IQ26 1287 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 ASRGL1Q7L266 308 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 C8orf59Q8N0T1 100 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-201ENST00000314191 PPCDCQ96CD2 204 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 RANBP9Q96S59 729 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 DGCR6LQ9BY27 220 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 RNF11Q9Y3C5 154 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 DNAJC15Q9Y5T4 150 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 ATF6P18850 670 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 GPM6BQ13491 265 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 TBC1D21Q8IYX1 336 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 SCN7AQ01118 1682 aa6.09□□□□□ -1.43
PRKDC-201ENST00000314191 SLC22A2O15244 555 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 SGTAO43765 313 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 KCNA5P22460 613 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 IDH2P48735 452 aaKnown RBP6.09□□□□□ -1.44
PRKDC-201ENST00000314191 NR1H2P55055 460 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 ANXA8L1Q5VT79 327 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 SLC2A7Q6PXP3 512 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 TSPAN33Q86UF1 283 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 PROSER1Q86XN7 944 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 MDGA1Q8NFP4 955 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 SLC22A14Q9Y267 594 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 CD70P32970 193 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 PPP1R8Q12972 351 aaKnown RBP6.09□□□□□ -1.44
PRKDC-201ENST00000314191 KCTD11Q693B1 232 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 NADSYN1Q6IA69 706 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.09□□□□□ -1.44
PRKDC-201ENST00000314191 C17orf64Q86WR6 236 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 PKP2Q99959 881 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 OSBPL11Q9BXB4 747 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 IGSF5Q9NSI5 407 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 DHRS7Q9Y394 339 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 ELOVL7A1L3X0 281 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 SMAD6O43541 496 aaKnown RBP6.09□□□□□ -1.44
PRKDC-201ENST00000314191 RHOP08100 348 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 RAB33AQ14088 237 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 GPR107Q5VW38 600 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 NCEH1Q6PIU2 408 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 GOLGA7Q7Z5G4 137 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 TMEM173Q86WV6 379 aaPredicted RBP6.09□□□□□ -1.44
PRKDC-201ENST00000314191 PGBD5Q8N414 524 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 AADATQ8N5Z0 425 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 ZFRQ96KR1 1074 aaKnown RBP6.09□□□□□ -1.44
PRKDC-201ENST00000314191 AP3M1Q9Y2T2 418 aa6.09□□□□□ -1.44
PRKDC-201ENST00000314191 G6PDP11413 515 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CTGFP29279 349 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 NTHL1P78549 312 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 KRT78Q8N1N4 520 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 GLMNQ92990 594 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 COL26A1Q96A83 441 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 MTERF1Q99551 399 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SLC7A5P2Q9GIP4 190 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 RNF38Q9H0F5 515 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CRISPLD1Q9H336 500 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SYNDIG1Q9H7V2 258 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 DUSP12Q9UNI6 340 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PITPNM1O00562 1244 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 DNAJB1P25685 340 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 GSTT1P30711 240 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ZNF648Q5T619 568 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ABRAXAS1Q6UWZ7 409 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PLD3Q8IV08 490 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 MMAAQ8IVH4 418 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ATAD3AQ9NVI7 634 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 H2AFY2Q9P0M6 372 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 A0A087WXM4 84 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 AGRPO00253 132 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 LDB2O43679 373 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 B4GALT3O60512 393 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PRPS2P11908 318 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 VIPR1P32241 457 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 DAB2P98082 770 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TMEM25Q86YD3 366 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ARMC7Q9H6L4 198 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ZDHHC4Q9NPG8 344 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CNOT6Q9ULM6 557 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3DA0A087WVF3 549 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3IA0A087WXS9 549 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3EA0A087X179 549 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3KA0A087X1G2 549 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms