RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 RAXQ9Y2V3 346 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 NBEAQ8NFP9 2946 aa11.78□□□□□ -0.52
SCFD1-201ENST00000311943 SDR42E2A6NKP2 422 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 VIPP01282 170 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 ELK3P41970 407 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 EIF3BP55884 814 aaKnown RBP11.77□□□□□ -0.52
SCFD1-201ENST00000311943 GABREP78334 506 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 CDK16Q00536 496 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 DMPKQ09013 629 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 ZNF549Q6P9A3 640 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 ELMO1Q92556 727 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 CCDC74BQ96LY2 380 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 CCM2Q9BSQ5 444 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 LRRC1Q9BTT6 524 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 ZCCHC2Q9C0B9 1178 aaKnown RBP11.77□□□□□ -0.52
SCFD1-201ENST00000311943 P2RY12Q9H244 342 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 OR52A5Q9H2C5 316 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 OCIAD1Q9NX40 245 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 GRHL1Q9NZI5 618 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 CDYLQ9Y232 598 aa11.77□□□□□ -0.52
SCFD1-201ENST00000311943 GPR89AB7ZAQ6 455 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 PRAMEF10O60809 474 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 GPR89BP0CG08 455 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 XRCC1P18887 633 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 GABRB3P28472 473 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 ZFP36L1Q07352 338 aaKnown RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 HSPA14Q0VDF9 509 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 NR1D2Q14995 579 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 ST3GAL2Q16842 350 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 CAPRIN2Q6IMN6 1127 aaKnown RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 TMEM26Q6ZUK4 368 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 FAM20CQ8IXL6 584 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 ACVR1CQ8NER5 493 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 OR5AR1Q8NGP9 310 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 ZCCHC14Q8WYQ9 949 aaKnown RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 CXorf40BQ96DE9 158 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 LINC00615Q96LM1 132 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 SARS2Q9NP81 518 aaKnown RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 C20orf96Q9NUD7 363 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-201ENST00000311943 MED16Q9Y2X0 877 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 NFS1Q9Y697 457 aa11.77□□□□□ -0.53
SCFD1-201ENST00000311943 CCDC188H7C350 402 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 HAUS5O94927 633 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 NSG1P42857 185 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 SLC1A2P43004 574 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 INHBCP55103 352 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CCSMST1Q4G0I0 132 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 ZNF470Q6ECI4 717 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CNSTQ6PJW8 725 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 FAM92BQ6ZTR7 304 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 SLC9B2Q86UD5 537 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 PIM3Q86V86 326 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 TRIM48Q8IWZ4 208 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 C2orf73Q8N5S3 287 aaPredicted RBP11.76□□□□□ -0.53
SCFD1-201ENST00000311943 LPGAT1Q92604 370 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 STAMBPL1Q96FJ0 436 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 NDNQ99608 321 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CTRCQ99895 268 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 KLHL25Q9H0H3 589 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 APMAPQ9HDC9 416 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 IARS2Q9NSE4 1012 aaKnown RBP11.76□□□□□ -0.53
SCFD1-201ENST00000311943 NCKIPSDQ9NZQ3 722 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CDC23Q9UJX2 597 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 RIMKLBQ9ULI2 386 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 MGAQ8IWI9 3026 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 KIR2DS5A0A0G2JLQ3 304 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 A0A0G2JNG1 304 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 FAM237BA0A1B0GVD1 139 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 KIR2DS3K7RE56 304 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CPNE6O95741 557 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 S1PR4O95977 384 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 RALBP11234 206 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 MTHFD1P11586 935 aaKnown RBP11.76□□□□□ -0.53
SCFD1-201ENST00000311943 MLNP12872 115 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 ITPKBP27987 946 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 SEPHS1P49903 392 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CUL1Q13616 776 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CRYMQ14894 314 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 KIR2DS5Q14953 304 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 TGIF1Q15583 401 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 KIAA0930Q6ICG6 404 aaPredicted RBP11.76□□□□□ -0.53
SCFD1-201ENST00000311943 NEPROQ6NW34 567 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 ZDHHC24Q6UX98 284 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 PACS1Q6VY07 963 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 UNC5AQ6ZN44 842 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 OR4E2Q8NGC2 313 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 CFAP61Q8NHU2 1237 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 GIMAP7Q8NHV1 300 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 TGM7Q96PF1 710 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 DEPDC7Q96QD5 511 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 HGH1Q9BTY7 390 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 ZMYND15Q9H091 742 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 XAB2Q9HCS7 855 aaKnown RBP11.76□□□□□ -0.53
SCFD1-201ENST00000311943 SAMD15Q9P1V8 674 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 PISDQ9UG56 409 aa11.76□□□□□ -0.53
SCFD1-201ENST00000311943 ANAPC5Q9UJX4 755 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms