RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 USP53Q70EK8 1073 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 TMEM135Q86UB9 458 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 MARCH9Q86YJ5 346 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 OR4D9Q8NGE8 314 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 ASZ1Q8WWH4 475 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 NCSTNQ92542 709 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 ATXN7L3BQ96GX2 97 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 ERP44Q9BS26 406 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 PPANQ9NQ55 473 aaKnown RBP19.4■□□□□ 0.7
VEGFB-201ENST00000309422 INTS10Q9NVR2 710 aaKnown RBP19.4■□□□□ 0.7
VEGFB-201ENST00000309422 SCHIP1Q9P0W5 487 aaPredicted RBP19.4■□□□□ 0.7
VEGFB-201ENST00000309422 ZNF624Q9P2J8 865 aaPredicted RBP19.4■□□□□ 0.7
VEGFB-201ENST00000309422 WDR37Q9Y2I8 494 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 ENTPD2Q9Y5L3 495 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 PRR19A6NJB7 356 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 C1QTNF9BB2RNN3 333 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 GOLGA8KD6RF30 607 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 GOLGA8TH3BQL2 631 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 B4GAT1O43505 415 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 OR1I1O60431 355 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 PROS1P07225 676 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 C1QTNF9P0C862 333 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 BRAFP15056 766 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 CSTF2P33240 577 aaKnown RBP eCLIP19.39■□□□□ 0.69
VEGFB-201ENST00000309422 CD151P48509 253 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 NKAIN2Q5VXU1 208 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 HIBCHQ6NVY1 386 aaPredicted RBP19.39■□□□□ 0.69
VEGFB-201ENST00000309422 CENPUQ71F23 418 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 OTOAQ7RTW8 1153 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 LDB1Q86U70 411 aaPredicted RBP19.39■□□□□ 0.69
VEGFB-201ENST00000309422 ARID1BQ8NFD5 2236 aaPredicted RBP19.39■□□□□ 0.69
VEGFB-201ENST00000309422 GPR150Q8NGU9 434 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 ZFPM2Q8WW38 1151 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 TBC1D10AQ9BXI6 508 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 DPH5Q9H2P9 285 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 POLR1BQ9H9Y6 1135 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 SLC40A1Q9NP59 571 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 THSD1Q9NS62 852 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 MARCH4Q9P2E8 410 aaPredicted RBP19.39■□□□□ 0.69
VEGFB-201ENST00000309422 SNX24Q9Y343 169 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 MRFAP1Q9Y605 127 aa19.39■□□□□ 0.69
VEGFB-201ENST00000309422 HGSO14964 777 aaPredicted RBP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 RAD51CO43502 376 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 SGTAO43765 313 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 ESR1P03372 595 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 RPS3P23396 243 aaKnown RBP eCLIP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CD1CP29017 333 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CAV1Q03135 178 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 PRKAA1Q13131 559 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 GPR18Q14330 331 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CRYMQ14894 314 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 TYSND1Q2T9J0 566 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 TMEM71Q6P5X7 295 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 WDR74Q6RFH5 385 aaPredicted RBP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 RAB11FIP2Q7L804 512 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 ZNF572Q7Z3I7 529 aaPredicted RBP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 PDZD3Q86UT5 571 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 KCNMB4Q86W47 210 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 FBXO39Q8N4B4 442 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 SKA2Q8WVK7 121 aaPredicted RBP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CFAP36Q96G28 342 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CNTNAP3BQ96NU0 1288 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 FERD3LQ96RJ6 166 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 EBNA1BP2Q99848 306 aaKnown RBP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 NUDT22Q9BRQ3 303 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CARD6Q9BX69 1037 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CNTNAP3Q9BZ76 1288 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 WHRNQ9P202 907 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 ZC3H7BQ9UGR2 993 aaKnown RBP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 SATB2Q9UPW6 733 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CFAP20Q9Y6A4 193 aaKnown RBP19.38■□□□□ 0.69
VEGFB-201ENST00000309422 PRSS21Q9Y6M0 314 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 MYLKQ15746 1914 aa19.38■□□□□ 0.69
VEGFB-201ENST00000309422 CTAGE15A4D2H0 777 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 PLD2O14939 933 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 MPOP05164 745 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 CTAGE8P0CG41 777 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 ITGB6P18564 788 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 MLLT3P42568 568 aaPredicted RBP19.37■□□□□ 0.69
VEGFB-201ENST00000309422 RPL21P46778 160 aaKnown RBP19.37■□□□□ 0.69
VEGFB-201ENST00000309422 CAPZBP47756 277 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 PREPP48147 710 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 LSSP48449 732 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 HSPA14Q0VDF9 509 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 SEMA3AQ14563 771 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 RTP5Q14D33 572 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 BRD3Q15059 726 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 TTLL9Q3SXZ7 439 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 SNAP47Q5SQN1 464 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 TMEM164Q5U3C3 297 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 CTAGE6Q86UF2 777 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 OOSP2Q86WS3 158 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 CILP2Q8IUL8 1156 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 CTAGE4Q8IX94 777 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 CCDC97Q96F63 343 aaPredicted RBP19.37■□□□□ 0.69
VEGFB-201ENST00000309422 ZDHHC12Q96GR4 267 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 SIGLEC10Q96LC7 697 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 CCDC74BQ96LY2 380 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 RMDN2Q96LZ7 410 aa19.37■□□□□ 0.69
VEGFB-201ENST00000309422 TRIT1Q9H3H1 467 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms