RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CLCN7P51798 805 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 NAA20P61599 178 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 FAM174BQ3ZCQ3 159 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 CCNYL2Q5T2Q4 361 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 IFNL1Q8IU54 200 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 PAF1Q8N7H5 531 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 GIPC3Q8TF64 312 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 ZNF583Q96ND8 569 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 ZNF382Q96SR6 550 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 ELOVL2Q9NXB9 296 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 PDE4DIPQ5VU43 2346 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 KDELR3O43731 214 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 HMOX2P30519 316 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 ATP5C1P36542 298 aaKnown RBP24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 MAGEA11P43364 429 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 ARF5P84085 180 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 MEP1AQ16819 746 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 ALG1LQ6GMV1 187 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 TBC1D15Q8TC07 691 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 AASSQ9UDR5 926 aa24.01■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC38A8A6NNN8 435 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 K7ERQ8 282 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 F11P03951 625 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 CDH1P12830 882 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 R3HCC1LQ7Z5L2 792 aaKnown RBP24■■□□□ 1.43
SPTSSA-201ENST00000298130 EGFL8Q99944 293 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 C1QTNF3Q9BXJ4 246 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC6A13Q9NSD5 602 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 DOLKQ9UPQ8 538 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 PRSS21Q9Y6M0 314 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 GSTA4O15217 222 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 ANXA6P08133 673 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 UMPSP11172 480 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 UGT1A1P22309 533 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 UGT1A4P22310 534 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 DCKP27707 260 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 MAP4P27816 1152 aaKnown RBP24■■□□□ 1.43
SPTSSA-201ENST00000298130 MZF1P28698 734 aaPredicted RBP24■■□□□ 1.43
SPTSSA-201ENST00000298130 CORO1AP31146 461 aaKnown RBP24■■□□□ 1.43
SPTSSA-201ENST00000298130 UGT1A3P35503 534 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 UGT1A5P35504 534 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 PRKCZQ05513 592 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 RING1Q06587 406 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 LAPTM4AQ15012 233 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 SBSNQ6UWP8 590 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 PROSER1Q86XN7 944 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 C10orf111Q8N326 155 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 GOLM1Q8NBJ4 401 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 TSPEARQ8WU66 669 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 DGCR6LQ9BY27 220 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 PCDHB3Q9Y5E6 796 aa24■■□□□ 1.43
SPTSSA-201ENST00000298130 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 BOLA2-SMG1P6H3BVE0 249 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 GSNP06396 782 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 AGXTP21549 392 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 HLCSP50747 726 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 TPD52P55327 224 aaPredicted RBP23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 CHRNB3Q05901 458 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 ZNF177Q13360 481 aaPredicted RBP23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 PHKG1Q16816 387 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 SPANXN4Q5MJ08 99 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 GPR63Q9BZJ6 419 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 PCDHGA8Q9Y5G5 932 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 ARVCFO00192 962 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 ANKRD28O15084 1053 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 FFAR2O15552 330 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 CD160O95971 181 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 ALPLP05186 524 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 THRBP10828 461 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 DAG1Q14118 895 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 PTRHD1Q6GMV3 140 aaKnown RBP23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 DHRS4L2Q6PKH6 230 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 OR2T12Q8NG77 320 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC22A17Q8WUG5 538 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 SNX19Q92543 992 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 KCNJ9Q92806 393 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 LHPPQ9H008 270 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 KLQ9UEF7 1012 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 CIDEBQ9UHD4 219 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 ADGRE2Q9UHX3 823 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 DNMT3LQ9UJW3 386 aa23.99■■□□□ 1.43
SPTSSA-201ENST00000298130 GNGT2O14610 69 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 CDH4P55283 916 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 BFSP2Q13515 415 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 SPESP1Q6UW49 350 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 EFL1Q7Z2Z2 1120 aaKnown RBP23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC22A15Q8IZD6 547 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 TTC30BQ8N4P2 665 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 ZNF639Q9UID6 485 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 MAGEL2Q9UJ55 1249 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 DGKBQ9Y6T7 804 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 SH3PXD2BA1X283 911 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 COCHO43405 550 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 DEAF1O75398 565 aaPredicted RBP23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 CST1P01037 141 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 SLC11A2P49281 568 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 ALDH3A2P51648 485 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 BTG3Q14201 252 aaPredicted RBP23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 ANKRD46Q86W74 232 aa23.98■■□□□ 1.43
SPTSSA-201ENST00000298130 PARP8Q8N3A8 854 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms