RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 CAPRIN2Q6IMN6 1127 aaKnown RBP19.45■□□□□ 0.7
TIMP4-201ENST00000287814 KCNMB4Q86W47 210 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 ELMO1Q92556 727 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 RMDN2Q96LZ7 410 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 OR52A5Q9H2C5 316 aa19.45■□□□□ 0.7
TIMP4-201ENST00000287814 FBXO6Q9NRD1 293 aaPredicted RBP19.45■□□□□ 0.7
TIMP4-201ENST00000287814 ATXN7L1Q9ULK2 861 aaPredicted RBP19.45■□□□□ 0.7
TIMP4-201ENST00000287814 FAM221BA6H8Z2 402 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 JUPP14923 745 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 CD1CP29017 333 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 GPR3P46089 330 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 SHC2P98077 582 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 TARDBPQ13148 414 aaKnown RBP eCLIP19.44■□□□□ 0.7
TIMP4-201ENST00000287814 AMZ1Q400G9 498 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 NKAIN2Q5VXU1 208 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 DUS1LQ6P1R4 473 aaKnown RBP19.44■□□□□ 0.7
TIMP4-201ENST00000287814 TMPRSS9Q7Z410 1059 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 ZBED8Q8IZ13 594 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 GALNT15Q8N3T1 639 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 DCBLD1Q8N8Z6 715 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 SYNDIG1Q9H7V2 258 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 EPB41L5Q9HCM4 733 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 SLC40A1Q9NP59 571 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 ZDHHC18Q9NUE0 388 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 SLC17A6Q9P2U8 582 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 FBXO5Q9UKT4 447 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 CLCA2Q9UQC9 943 aa19.44■□□□□ 0.7
TIMP4-201ENST00000287814 SLC5A10A0PJK1 596 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 ZNF500O60304 480 aaPredicted RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 VIPP01282 170 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 GSTM1P09488 218 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 HALP42357 657 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 PDX1P52945 283 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 MPP1Q00013 466 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 GSTM4Q03013 218 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CFHR1Q03591 330 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 PTRHD1Q6GMV3 140 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 USP53Q70EK8 1073 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 SPNS2Q8IVW8 549 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CXorf40BQ96DE9 158 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CERS2Q96G23 380 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 C12orf66Q96MD2 445 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 SLC38A3Q99624 504 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 TBC1D10AQ9BXI6 508 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 RDH14Q9HBH5 336 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 SAYSD1Q9NPB0 183 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 POT1Q9NUX5 634 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 IMP3Q9NV31 184 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 INTS10Q9NVR2 710 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 COL27A1Q8IZC6 1860 aaPredicted RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 IGHV1OR21-1A0A087WYE8 117 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 HAUS5O94927 633 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 SLC35G4P0C7Q5 338 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 MTHFD1P11586 935 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CSE1LP55060 971 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 ADARP55265 1226 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CAV1Q03135 178 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 BOP1Q14137 746 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 RNF187Q5TA31 235 aaPredicted RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 ZNF549Q6P9A3 640 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CCNI2Q6ZMN8 369 aaPredicted RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 TMEM26Q6ZUK4 368 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 LRRC6Q86X45 466 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 TRIM48Q8IWZ4 208 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CALML6Q8TD86 181 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 GFM1Q96RP9 751 aaKnown RBP19.43■□□□□ 0.7
TIMP4-201ENST00000287814 L2HGDHQ9H9P8 463 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 KCNK4Q9NYG8 393 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 GALPQ9UBC7 116 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 GNPTGQ9UJJ9 305 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 ANGPTL2Q9UKU9 493 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 CDYLQ9Y232 598 aa19.43■□□□□ 0.7
TIMP4-201ENST00000287814 KNTC1P50748 2209 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 ASPMQ8IZT6 3477 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 LIN7AO14910 233 aaPredicted RBP19.42■□□□□ 0.7
TIMP4-201ENST00000287814 NIPSNAP2O75323 286 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 GABRB3P28472 473 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 RPA4Q13156 261 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 SPIDRQ14159 915 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 GPR18Q14330 331 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 GLE1Q53GS7 698 aaKnown RBP19.42■□□□□ 0.7
TIMP4-201ENST00000287814 CNSTQ6PJW8 725 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 B3GNT8Q7Z7M8 397 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 VRK3Q8IV63 474 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 LMNTD2Q8IXW0 634 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 C2CD4AQ8NCU7 369 aaPredicted RBP19.42■□□□□ 0.7
TIMP4-201ENST00000287814 SH3KBP1Q96B97 665 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 FAM167BQ9BTA0 163 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 STN1Q9H668 368 aaKnown RBP19.42■□□□□ 0.7
TIMP4-201ENST00000287814 NEUROG3Q9Y4Z2 214 aa19.42■□□□□ 0.7
TIMP4-201ENST00000287814 EIF3HO15372 352 aaKnown RBP eCLIP19.41■□□□□ 0.7
TIMP4-201ENST00000287814 GPC4O75487 556 aa19.41■□□□□ 0.7
TIMP4-201ENST00000287814 TCEA3O75764 348 aa19.41■□□□□ 0.7
TIMP4-201ENST00000287814 AOAHP28039 575 aa19.41■□□□□ 0.7
TIMP4-201ENST00000287814 CARSP49589 748 aaKnown RBP19.41■□□□□ 0.7
TIMP4-201ENST00000287814 AKAP13Q12802 2813 aa19.41■□□□□ 0.7
TIMP4-201ENST00000287814 CAMK2BQ13554 666 aa19.41■□□□□ 0.7
TIMP4-201ENST00000287814 ISXQ2M1V0 245 aa19.41■□□□□ 0.7
TIMP4-201ENST00000287814 TEDDM1Q5T9Z0 273 aa19.41■□□□□ 0.7
TIMP4-201ENST00000287814 ZNF574Q6ZN55 896 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms