RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 MERTKQ12866 999 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 BCL2A1Q16548 175 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 PSKH2Q96QS6 385 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 FBXW2Q9UKT8 454 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 MKLN1Q9UL63 735 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 H7C2Y5 167 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 EPHB6O15197 1021 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 GRM6O15303 877 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 DRD4P21917 467 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 TSSK3Q96PN8 268 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 USP20Q9Y2K6 914 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 FXYD6-FXYD2A0A087WZ82 144 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 TMEM150CB9EJG8 249 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 PEX12O00623 359 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 SCAMP3O14828 347 aaKnown RBP13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 B3GALT2O43825 422 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 EPCAMP16422 314 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 RPL22P35268 128 aaKnown RBP13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 GNPDA1P46926 289 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 HCAR3P49019 387 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 DSG2Q14126 1118 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 CLIP4Q8N3C7 705 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 MYO9BQ13459 2157 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 TRAPPC6AO75865 159 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ITPKAP23677 461 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 RASGRP3Q8IV61 690 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 C4orf19Q8IY42 314 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 TATDN2Q93075 761 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 NPAS2Q99743 824 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 MUSKO15146 869 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 MSCO60682 206 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 MAPTP10636 758 aaKnown RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 HOXB9P17482 250 aaPredicted RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 PSMD8P48556 350 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SP2Q02086 613 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SLC20A2Q08357 652 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 MRPL49Q13405 166 aaKnown RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SEMA5AQ13591 1074 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ARL8BQ9NVJ2 186 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF180Q9UJW8 692 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 KCNS2Q9ULS6 477 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 CNTNAP5Q8WYK1 1306 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 TVP23AA6NH52 213 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 TPST2O60704 377 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 CXCR1P25024 350 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 CDC25CP30307 473 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 HSPB3Q12988 150 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 LRP8Q14114 963 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF280BQ86YH2 543 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SAMD14Q8IZD0 417 aaPredicted RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 PROKR2Q8NFJ6 384 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 HDAC10Q969S8 669 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 TMEM125Q96AQ2 219 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 PLEKHA3Q9HB20 300 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 PCDHB1Q9Y5F3 818 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 PCDHGA6Q9Y5G7 932 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ARHGEF40Q8TER5 1519 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ITGA2BP08514 1039 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 POLR2JP52435 117 aaKnown RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 GIT2Q14161 759 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ATAT1Q5SQI0 421 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ATAD3CQ5T2N8 411 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SLC9B2Q86UD5 537 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 REPS2Q8NFH8 660 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 GTPBP3Q969Y2 492 aaKnown RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 BRD7Q9NPI1 651 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 FBP2O00757 339 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 OR1F1O43749 312 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SLC37A4O43826 429 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 RECQL4O94761 1208 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 LATS1O95835 1130 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 SSX3Q99909 188 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 CLCA3PQ9Y6N3 262 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 KDM5CP41229 1560 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 HTR3EA5X5Y0 456 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 CCRL2O00421 344 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 KDELR1P24390 212 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 LUMP51884 338 aaPredicted RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 RBM23Q86U06 439 aaKnown RBP13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 TRAF6Q9Y4K3 522 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 USP6P35125 1406 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 H3BNX3 289 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 PIRTP0C851 137 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 E2F1Q01094 437 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 GLYATQ6IB77 296 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 P2RY8Q86VZ1 359 aa13.05□□□□□ -0.32
SMARCA5-201ENST00000283131 TEX19Q8NA77 164 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms