RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 TMEM207Q6UWW9 146 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 SLC43A3Q8NBI5 491 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 APPL2Q8NEU8 664 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 JPH3Q8WXH2 748 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 VMP1Q96GC9 406 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 AGAP4Q96P64 663 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 OR2B2Q9GZK3 357 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 ABCD2Q9UBJ2 740 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CACNG4Q9UBN1 327 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 USP3Q9Y6I4 520 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 LOC110117498-PIK3R3F6TDL0 507 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 SLC22A3O75751 556 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 ANXA6P08133 673 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 MLLT3P42568 568 aaPredicted RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 SERPINH1P50454 418 aaKnown RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 POLR2JP52435 117 aaKnown RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 BEX3Q00994 111 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 ARMC4Q5T2S8 1044 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 HECTD2Q5U5R9 776 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 C8orf82Q6P1X6 216 aaPredicted RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 BLOC1S3Q6QNY0 202 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 B3GNT8Q7Z7M8 397 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
HERC6-202ENST00000273960 SLC47A1Q96FL8 570 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 VPS35Q96QK1 796 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 VAT1Q99536 393 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 KAT8Q9H7Z6 458 aaKnown RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 GOLGA2P5Q9HBQ8 144 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 SCN3BQ9NY72 215 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 IPPQ9Y573 584 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 LOC105371267A0A1B0GV96 52 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 A8MX80 341 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 M0R129 80 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 KMOO15229 486 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 DFNA5O60443 496 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 BEST1O76090 585 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 ALX3O95076 343 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 PRSS56P0CW18 603 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 UQCRC1P31930 480 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 LIPAP38571 399 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 SLC26A2P50443 739 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 ISL1P61371 349 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 RBP5P82980 135 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 ALDH6A1Q02252 535 aaKnown RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 CES5AQ6NT32 575 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 TBL1YQ9BQ87 522 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 OR51E2Q9H255 320 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 TIGARQ9NQ88 270 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 TMEM39AQ9NV64 488 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 SATB2Q9UPW6 733 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 GMPPBQ9Y5P6 360 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 MAU2Q9Y6X3 613 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 MAGEB16A2A368 324 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 ACKR2O00590 384 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 DPYSL4O14531 572 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 FHP07954 510 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 MVKQ03426 396 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 BST2Q10589 180 aaKnown RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 PSMD5Q16401 504 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 GTDC1Q4AE62 458 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 SNAPC3Q92966 411 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 SARS2Q9NP81 518 aaKnown RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 COMMD8Q9NX08 183 aa12.65□□□□□ -0.38
HERC6-202ENST00000273960 PIN4Q9Y237 131 aaKnown RBP12.65□□□□□ -0.38
HERC6-202ENST00000273960 A0A1W2PP18 115 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 AGAP5A6NIR3 686 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 I6L893 689 aaPredicted RBP12.64□□□□□ -0.39
HERC6-202ENST00000273960 hCG_2039718K7EN88 272 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 MTSS1O43312 755 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 SEMA3DO95025 777 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 HADHAP40939 763 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 DEFA1P59665 94 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 DEFA3P59666 94 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 FSCN1Q16658 493 aaKnown RBP12.64□□□□□ -0.39
HERC6-202ENST00000273960 PTCHD3Q3KNS1 767 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 PCID2Q5JVF3 399 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 BEND5Q7L4P6 421 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 HCAR2Q8TDS4 363 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.39
HERC6-202ENST00000273960 ZNF451Q9Y4E5 1061 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 OR6C70A6NIJ9 312 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 BBIP1A8MTZ0 92 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 MOCS2O96007 188 aaPredicted RBP12.64□□□□□ -0.39
HERC6-202ENST00000273960 RAP2AP10114 183 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 ARF4P18085 180 aaPredicted RBP12.64□□□□□ -0.39
HERC6-202ENST00000273960 POLR2EP19388 210 aaKnown RBP12.64□□□□□ -0.39
HERC6-202ENST00000273960 IMPDH1P20839 514 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 GJA5P36382 358 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 PAMR1Q6UXH9 720 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 LRRC8DQ7L1W4 858 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
HERC6-202ENST00000273960 CNDP2Q96KP4 475 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms